Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi221g00048 ATGGAGATTCAGCCGGTTTCAGAACAACCGCTTCGAGCAGTACGCGGTATATTAGCTCGTCATAGGCAAATGCTAGAACCCTTGTACGAGGATTTTCATCGGATTGGTGCTGGGAAATTCGGAGATGTTTTCAGGTGCAGGGACCGATTGACTCAACAAGATGTGGCCGTCAAGATTATCACTATTCCAGAAAATGAGAAAAGAAATGGACTTCCATGTAGAATCATAAGAGAAGTCTCTATTCTTAAAGAGTTGGATCATATCAATGTTGTGAGGTATACATTTCTCTGA 291 0.4192 MEIQPVSEQPLRAVRGILARHRQMLEPLYEDFHRIGAGKFGDVFRCRDRLTQQDVAVKIITIPENEKRNGLPCRIIREVSILKELDHINVVRYTFL 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi221g00048 96 ProSiteProfiles Protein kinase domain profile. 29 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi221g00048 96 Pfam Protein kinase domain 29 93 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi221g00048 96 Gene3D Phosphorylase Kinase; domain 1 18 95 - -
Sebi221g00048 96 ProSitePatterns Protein kinases ATP-binding region signature. 35 58 IPR017441 GO:0005524
Sebi221g00048 96 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 26 93 - -
Sebi221g00048 96 SUPERFAMILY Protein kinase-like (PK-like) 24 93 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi221g00048 Sebi-Chr221 873348 874031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi221g00048 29 92 Core Cell Cycle Gene Families AT3G48750 39.062 1.08e-11 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Sebi221g00048 Pkinase 5.4e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi221g00048 K02206 K04563 cit:107174342 69.3218