Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi221g00039 ATGCTATCAGCTTCGCCATGCTCGCTTACGAGAAGCTCGCTGGAAGAGATGCTTGATTCGCTTCGCCGGAAGGATGAGGAGGAAGAGAAGAAGAAGGACCTGCCGCCGGCGTTGCCTGCACGGCCGGCTTCACGGGCCCGGCTTCCTCCGGCACGGCGGTCGCTGCCGAATAACTTCAAGGTCGGTGACAGCGACGGTGGCGCAGTGGAGAATGGATTTGGTGGCAATGGAGAGAGTAAGAGGAAGGAAACAGGTTTTGGACACATGAGAAGAGGAAGCAGTTTTGGGAGCAAGAGGATGAAGAAGGATGTGGAGTGCCCTTACGTGGCAGCACTTTCAGCATCCACTGCTTCTGTGGCTTCATCAGGGATGGTTTTGGAATTCGATGGTGACAGTGTTTCTTATTTCATGAAAACGAAACTTCGTGTTTGGTGTAGGCAACCAAGAGGACAATGGGAACTAGGATCAGTACAGTCAACTTCAGGGGAGGAAGCATATGTTTCACTCTCAAATGGAAATGTTGTAAAAGTGGCCAGATCAGAGCTTGTACCAGCCAATCCTGATATTTTAGAGGGTGCGGATGATCTTATTAAACTTGGTTATGTGAATGAGCCATCGGTTCTTCACAATCTTAAGCTTAGATATTCTCAGGAGATGATTTATAGTAAAGCAGGGCCCATTTTGATTGCACTCAATCCTTTCAAAAGTTTCCAGATTTATGGAAATGATCATGTCTCCACTTATAGGCAGAGATTTATTGATAGTCCTCATGTTTATGCTATGGTAGAAGCAGCTTATAACAAAATGATAAGAGGTGAATATCCTCTCTCCTCCTTTGAGATCTTTGAGCTGTACTCCAACTATGAAGTGAATCAGTCCATTATCATAAGTGGTGAGAGTGGATCTGGGAAGACAGAGACAGCTAAAATTGCTATGCAATACTTAGCTGCTCTTGGTGATGGCAGTTGTGGGATAGAAAATGAAATTCTTCAGACAAATTGTATACTTGAAGCTTTTGGGAATGCAAAAACAGCTATAAATGACAACTCCAGCAGATTTGGAAAGTTGATTGAAATTCATTTCAGCACCATGGGTAAAATATGTGGGGCTAAAATTCAAACCTATCTGTTGGAAAAGTCAAGAGTTGCTCAACTGGCCAATTGTGAGAGGTCGTATCACATATTTTATCAACTTTGTGCTGGATCTTCATCTCGTCTTAAAGAGAGCTTGAATCTTAGAGCAGCTAGTGAATATAAATATCTAAATCAGAGTGACTGCATGACGATTGATGGTGTTGATGATGCTAAAAAGTTTCATCAGCTGACGAAAGCACTGGATACTGTTCAAATCTGTAATGAGGATCGAGAGCTGATCTTTAAGGTGCTTGCTGCAATACTATGGCTTGGAAATATATCATTCCAAGTTACTAACAGTGGAAATCATATTGAGGTTGTCGATGATGAAGCTAACTGGGACTCACTTGGATTCTTTGCAATGCCATATGGGCAGAAAAAGACTTTGAAGTGGTTCACTGTAACCAATGCTGCCCTGCTGATGGGTTGCAGTTCCAAGGAATTAATGGAAGCATTATCTACCCATAAGATCCAATCTGACAAGGATACTATTGCTAAAAGTTTGACATTGCGGCAGGCAATTGATACTAGAGATGCACTTGCAAAATTTATGTACGGAAGCTTGTTTGACTGGCTTGTAGAACAAGTTAACAAATCACTTGTGGTGGATAAAAAATGTACTGGGAAATCCATAAGTATCCTTGATATTTTTGGGTTTCAGTCATTACAGAAAAATGGCTTTGAACAATTTTGTATAAATTATGCCAATGAGAGGCTTCAACAACATTTTAATCGGCATCTGTTTAAATTGGAGCAGGAGGACTATGAATCGGATGGCATCGATTGGACTAAAGTAGATTTTGTGGACAATCAAGAGTGCTTGGATCTATTTGAGAAGAAACCACTGGGTCTATTCTCTTTGTTGGACGAGGAATCAGATTTCCCCAAGGCTTCTGATTTAACATTTGCTAACAAACTTAAGAAACACCTGGACGCTAATCCTTGCTTCAAAGGGGAAAGAGGCAGAGCTTTCGGTGTTCGTCACTATGCAGGGGAGGTTTTGTATGATACAAATGGCTTTCTAGAAAAGAACAGAGATACATTGTCTTCTGATTCCATTCAACTCCTGTCATCATGTGATTGTGAACTGCTGCAATTGTTCTCCAAAATGTTCAACCAGTCTCAGAAGCAACCAAATTCCCCCTTCCACATTGATGCACTGGATTCACAGAACCAGGGTGTTGGAACAAAATTCAAGGGTCAAGTGTTCAAGTTGATGCATCAGTTGGAGAGCACCACTCCTCACTTTATTCGCTGTATAAGGCCAAATACCAAGCAGCTTCCTGGCATTTATGATGATGACCTTGTCCTACAACAGCTCAGGTGTTGTGGAGTTCTAGAAGTTGTTAGAATCTCAAGGGCTGGATATCCTACCCGAATGACCCATCAAGAGTTTTCCAGAAGGTATGCATTTTTGTTCTCTGAGGCCAACATATCTAAGGACCCATTGAGCATCTCAGTTGCTGTTTTGCAAAAATTTAATATCCCTTCTGAAATGTATCAAGTTGGCTTCACCAAACTGTATCTTCGAGCTGGGCAGATTGATGCACTGGAGGATAAGAGAATGCAGGTTTTGCAGGGAATAATTGGGATTCAAAAATGCTTCCGTGGTCATCAAGCTCGCAGTTATTTCCGTGAACTTAAGAATGGAGTTGCGACATTACAATCATTTATTCGTGGAGAAATTACGAGAAGGAAATGTCGTGTTGTGATGAAGTCTTCTATAACTATTTATTCTAAAAAACTTGAGGAGATCCATGCAATCATACTACTACAATCTGTAATTCGTGGGTGGCTGGTTCGAAGGGATTCTAGTCACATGAATAAGTTGAGGAAAGATCATGAGAATGCAAAACCTAGACGGAAGTCTCGTGTAAAGTTGCCGGAATTAAAGGATTTGTCCAAAGAGCTGGTTCAGAATCTGCCTTCAGCTTTAGCAGAACTCCAAAAGCGGGTTTACAAGGCTGAAGTAATTGTAGAGCAGAAGGAAGAGGAAAATAATGAATTGAGGGAACAACTAAAACAATCTGAGAAAAAGAGGGATGAATACGAAGCAAAGATGAAATCAATGGAGGAGGCATGGCAAAAGCAGATGGCATCTTTGCAAATGAGTCTTGTTGCTGCTAGAAAAAGCCTTGCTTCTGATAATGCCACTGTTCAACCTGTAAGACATGATCTTGTGTCACCTCGTGGCTATGAATCTGAAGATGCTACATCCATGGGATCTCGGACACCTGGTGGAAGCACACCTATAAAGTTCTCTGGTAGTCTTTCTGTCTCTGATATCGGGAGACATGCTAATGGTACATTGACCACAGTCAGCGATTTAATGAAGGAATTTGAGCAGCGAAGACAGATCTTCGATGGTGAAGTGAGAGCTCTGAATGAGGTTAAACCAAGTCAGTCTGCTAACACAAATTCCATGGAAGAACTTCGAAAACTTAAACAGAGATTTGAGGGATGGAAGAAACAATACAAAGTTAGACTACGTGAGACAAAATCAAAGCTTCTTAAATCAGGGAATTCAGAAACAGATAAAAGTCGGTGGACATGGTGGGGGAAACTAGGTTCAAGAGCATAA 3714 0.4168 MLSASPCSLTRSSLEEMLDSLRRKDEEEEKKKDLPPALPARPASRARLPPARRSLPNNFKVGDSDGGAVENGFGGNGESKRKETGFGHMRRGSSFGSKRMKKDVECPYVAALSASTASVASSGMVLEFDGDSVSYFMKTKLRVWCRQPRGQWELGSVQSTSGEEAYVSLSNGNVVKVARSELVPANPDILEGADDLIKLGYVNEPSVLHNLKLRYSQEMIYSKAGPILIALNPFKSFQIYGNDHVSTYRQRFIDSPHVYAMVEAAYNKMIRGEYPLSSFEIFELYSNYEVNQSIIISGESGSGKTETAKIAMQYLAALGDGSCGIENEILQTNCILEAFGNAKTAINDNSSRFGKLIEIHFSTMGKICGAKIQTYLLEKSRVAQLANCERSYHIFYQLCAGSSSRLKESLNLRAASEYKYLNQSDCMTIDGVDDAKKFHQLTKALDTVQICNEDRELIFKVLAAILWLGNISFQVTNSGNHIEVVDDEANWDSLGFFAMPYGQKKTLKWFTVTNAALLMGCSSKELMEALSTHKIQSDKDTIAKSLTLRQAIDTRDALAKFMYGSLFDWLVEQVNKSLVVDKKCTGKSISILDIFGFQSLQKNGFEQFCINYANERLQQHFNRHLFKLEQEDYESDGIDWTKVDFVDNQECLDLFEKKPLGLFSLLDEESDFPKASDLTFANKLKKHLDANPCFKGERGRAFGVRHYAGEVLYDTNGFLEKNRDTLSSDSIQLLSSCDCELLQLFSKMFNQSQKQPNSPFHIDALDSQNQGVGTKFKGQVFKLMHQLESTTPHFIRCIRPNTKQLPGIYDDDLVLQQLRCCGVLEVVRISRAGYPTRMTHQEFSRRYAFLFSEANISKDPLSISVAVLQKFNIPSEMYQVGFTKLYLRAGQIDALEDKRMQVLQGIIGIQKCFRGHQARSYFRELKNGVATLQSFIRGEITRRKCRVVMKSSITIYSKKLEEIHAIILLQSVIRGWLVRRDSSHMNKLRKDHENAKPRRKSRVKLPELKDLSKELVQNLPSALAELQKRVYKAEVIVEQKEEENNELREQLKQSEKKRDEYEAKMKSMEEAWQKQMASLQMSLVAARKSLASDNATVQPVRHDLVSPRGYESEDATSMGSRTPGGSTPIKFSGSLSVSDIGRHANGTLTTVSDLMKEFEQRRQIFDGEVRALNEVKPSQSANTNSMEELRKLKQRFEGWKKQYKVRLRETKSKLLKSGNSETDKSRWTWWGKLGSRA 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi221g00039 1237 FunFam Unconventional myosin-XIX 600 790 - -
Sebi221g00039 1237 SMART MYSc_2a 185 901 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi221g00039 1237 MobiDBLite consensus disorder prediction 1 15 - -
Sebi221g00039 1237 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 138 187 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sebi221g00039 1237 Coils Coil 1023 1071 - -
Sebi221g00039 1237 Coils Coil 1182 1202 - -
Sebi221g00039 1237 MobiDBLite consensus disorder prediction 16 36 - -
Sebi221g00039 1237 MobiDBLite consensus disorder prediction 1108 1127 - -
Sebi221g00039 1237 ProSiteProfiles IQ motif profile. 925 954 IPR000048 GO:0005515
Sebi221g00039 1237 FunFam Myosin heavy chain 390 446 - -
Sebi221g00039 1237 Pfam Myosin head (motor domain) 194 888 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi221g00039 1237 PANTHER MYOSIN 184 1219 - -
Sebi221g00039 1237 Pfam IQ calmodulin-binding motif 906 923 IPR000048 GO:0005515
Sebi221g00039 1237 Pfam IQ calmodulin-binding motif 964 980 IPR000048 GO:0005515
Sebi221g00039 1237 ProSiteProfiles Myosin motor domain profile. 191 900 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi221g00039 1237 Gene3D Kinesin motor domain 190 833 IPR036961 -
Sebi221g00039 1237 Gene3D - 905 952 - -
Sebi221g00039 1237 Gene3D - 390 446 - -
Sebi221g00039 1237 Gene3D - 834 901 - -
Sebi221g00039 1237 Gene3D Myosin VI head, motor domain, U50 subdomain 447 577 - -
Sebi221g00039 1237 Gene3D - 600 790 - -
Sebi221g00039 1237 SMART iq_5 961 983 IPR000048 GO:0005515
Sebi221g00039 1237 SMART iq_5 901 923 IPR000048 GO:0005515
Sebi221g00039 1237 SMART iq_5 924 946 IPR000048 GO:0005515
Sebi221g00039 1237 MobiDBLite consensus disorder prediction 1113 1127 - -
Sebi221g00039 1237 Coils Coil 11 31 - -
Sebi221g00039 1237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 985 IPR027417 -
Sebi221g00039 1237 CDD MYSc_Myo8 205 888 IPR036022 -
Sebi221g00039 1237 PRINTS Myosin heavy chain signature 641 669 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi221g00039 1237 PRINTS Myosin heavy chain signature 221 240 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi221g00039 1237 PRINTS Myosin heavy chain signature 588 616 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi221g00039 1237 PRINTS Myosin heavy chain signature 334 361 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi221g00039 1237 PRINTS Myosin heavy chain signature 291 316 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi221g00039 1237 ProSiteProfiles IQ motif profile. 904 931 IPR000048 GO:0005515
Sebi221g00039 1237 MobiDBLite consensus disorder prediction 1 94 - -
Sebi221g00039 1237 ProSiteProfiles IQ motif profile. 962 991 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi221g00039 Sebi-Chr221 678680 689813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi221g00039 1 1234 Myosins gene family AT5G54280 58.255 0.0 1440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi221g00039 K10357 - gmx:100802074 1690.24