LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi221g00038	ATGGCAGCAACATTGATGGCAGCCACAGCAAGCACTGGCACAGTTCTTAAACCAACTCCTTTCCTTGGCCAAACTAGGGGAACCAACACCAACCCTCTTAGAGATGTTGTCTCTCTTGGAGCTGGGAAATACACCATGGGAAATGAATTGTGGTATGGACCAGACAGAGTGAAATACTTAGGACCCTTTTCAGCTCAGACTCCATCATACTTGACTGGAGAATTCCCAGGTGACTATGGATGGGACACTGCTGGGTTGTCTGCTGACCCTGAAGCATTTGCTAGGAACAGGGCTCTTGAGGTGATCCATGGACGTTGGGCTATGCTTGGAGCACTAGGCTGCATCACCCCTGAAGTGCTTGAGAAATGGGTTAGAGTGGACTTCAAAGAACCAGTTTGGTTCAAAGCTGGAGCTCAGATATTCTCAGAAGGTGGCCTTGACTACTTGGGGAACCCCAACCTTGTTCATGCACAAAGCATCCTAGCAGTGCTAGGCTTCCAAGTTGTTCTGATGGGTCTTGTTGAAGGATTCCGTATCAATGGCCTTCCTGGTGTTGGAGAGGGTAACAATCTGTACCCTGGTGGTCAGTACTTTGACCCTCTTGGTCTTGCTGATGACCCTGTCACTTTTGCTGAGCTCAAGGTTAAGGAGATCAAGAATGGTAGGTTGGCTATGTTCTCCATGTTTGGTTTCTTTGTCCAAGCCATTGTGACTGGAAAAGGACCACTTGAGAACCTTTTGGATCACCTTGACAACCCTGTGGCTAACAATGCTTGGGTCTATGCCACCAAGTTTGTGCCCGGTTCTTAA	810	0.4827	MAATLMAATASTGTVLKPTPFLGQTRGTNTNPLRDVVSLGAGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS	269

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi221g00038	269	Pfam	Chlorophyll A-B binding protein	68	235	IPR022796	-
	Sebi221g00038	269	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	18	268	IPR001344	GO:0009765\|GO:0016020
	Sebi221g00038	269	FunFam	Chlorophyll a-b binding protein, chloroplastic	58	262	-	-
	Sebi221g00038	269	SUPERFAMILY	Chlorophyll a-b binding protein	50	266	-	-
	Sebi221g00038	269	Gene3D	Chlorophyll a/b binding protein domain	58	262	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi221g00038	Sebi-Chr221	676192	677562	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi221g00038	14	268	Chloroplast and Mitochondria Gene Families	AT2G05070	68.561	3.50e-123	350

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi221g00038	K08914		-	cave:132175650	535.413

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