Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi221g00027 ATGATGGAAGGGGTTTCAAGGGAAGCCCAGATGTCGATTGCAGCTTCGTCCATGTTTCCTGGGTTCAGGTTTTGCCCCACCGACGAGGAGTTGATTTCATATTACCTTAGGAAGAAATTGGATGGCCATGAAGAGAGTGTTCAAGTTATTTCTGAGGTTGAGCTTTGTAAATATGAGCCTTGGGATTTACCAGATAACGAGTGGTTCTTCTTCTCTCCCCGTGGAAGAAAGTATCCAAATGGTTCACAAAGTAAAAGAGCAACAGAATGTGGCTATTGGAAGGCCACTGGCAAAGAGCGCAATGTAAAATCAGGTTCTAACATTATAGGTACAAAACGAACTTTGGTATTCCACTTAGGACGTGCACCTAAAGGGGAAAGGACTGAATGGATTATGCATGAGTACTGCATCAATGATAAGTCTCAGGATTCTTTGGTGGTTTGTCGCCTTAAGAGGAACACAGAATTCCGTTTACACGATGCTTCAAATAGAGCTTCTTCAAGTCAAATGCACCCTGTGAATTCACATGAAAGTGATTGTGCTGTCTCAGGAGGTGGTGGCATAGATCAAAGTGGTGGCTGTGAGCAAGACAAAGAGATTGGATGTTGCTCCAAAAGGAGCAGTAGCAGTTATGGTTCTCCTTCAATGGAGCAAATTGACTCTGTATCTGAATCAAATCAGCGACCAGCTAATGATGCTGCTCTAACAGAATCTTCTGATCACTTAAAGGAGGTGGATGAAGAGGATTGTTATGCTGAGATACTAAAGGATGATATCATCAAATTAGATGAATCATCAATCCAACAAGAGGCTCACACAAGACAACAGGAACCTACACAGGTATAG 846 0.4255 MMEGVSREAQMSIAASSMFPGFRFCPTDEELISYYLRKKLDGHEESVQVISEVELCKYEPWDLPDNEWFFFSPRGRKYPNGSQSKRATECGYWKATGKERNVKSGSNIIGTKRTLVFHLGRAPKGERTEWIMHEYCINDKSQDSLVVCRLKRNTEFRLHDASNRASSSQMHPVNSHESDCAVSGGGGIDQSGGCEQDKEIGCCSKRSSSSYGSPSMEQIDSVSESNQRPANDAALTESSDHLKEVDEEDCYAEILKDDIIKLDESSIQQEAHTRQQEPTQV 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi221g00027 281 MobiDBLite consensus disorder prediction 205 234 - -
Sebi221g00027 281 SUPERFAMILY NAC domain 10 152 IPR036093 GO:0003677|GO:0006355
Sebi221g00027 281 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 225 - -
Sebi221g00027 281 MobiDBLite consensus disorder prediction 161 184 - -
Sebi221g00027 281 Pfam No apical meristem (NAM) protein 20 136 IPR003441 GO:0003677|GO:0006355
Sebi221g00027 281 Gene3D NAC domain 27 175 IPR036093 GO:0003677|GO:0006355
Sebi221g00027 281 ProSiteProfiles NAC domain profile. 18 153 IPR003441 GO:0003677|GO:0006355
Sebi221g00027 281 MobiDBLite consensus disorder prediction 205 246 - -
Sebi221g00027 281 MobiDBLite consensus disorder prediction 161 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi221g00027 Sebi-Chr221 509814 512949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi221g00027 5 280 NAC Transcription Factor Family AT2G27300 52.650 3.73e-96 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi221g00027 NAM 1.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi221g00027 - - cam:101495489 472.626