Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi220g00070 ATGGCTGTGGTGAGTCCTGTGCCTGCAACAACACAGAGGACCCGTTCTATGGGTTCGGTTCGTGAAATTGGGGGAGAAATTGTTGAGGAACCTAATCCAGCTGTGGTTGATGAGCCAATCTATGTTGCTGTGGCAAAGGATGTAAAAGAGAGCAAATTGAATCTAATATGGGCAATACAGAACTCTGGAGGAAAGAGGATCTGCATCCTCTATGTTCATGTGCCTGCAACAATGATCCCTTTAATGGGTGCTAAATTCCCTGCAAGTTCATTGAAAGAGCAGGAAGTCCGAGCATTCCGGGAAATTGAAAGGCAAGACATGCACAAGACTCTGGATGAATATCTTCGTATCTGTCAACGGATGGGGGTTCGAGCAGAGAAACTGCATATTGAAATGGATAGCATTGAAAAAGGAATTATAGAACTCATCTCCCAGCATGGCATCCGAAAGCTTGTTATGGGAGCAGCATCTGATAAATGCTATTCTAGGAGAATGATGGACCTCAGATCTAAGAAAGCCATCTATGTACGTGAACAAGCTCCGGCTTCTTGTCATATACAGTTTATCTGCAAAGGACACCTTATACACACAAGGGATCGCAGTTTGGGTGAACGTAATGCAGAGGTTGCATCTCCTTTGGTGCACCAAGTGCCAAACTCTGTGAGATCTTTGAGATCTCAATCTATTACACTGGGGCAAAATCATTGGGAAAATTCAACTAATCATGCTCAAGAGTTATTTCGCAGAGTAAGGTCTGCCAATGATGGACTTGGAGCAAGCACTGTGGCTGCTTCTTCTCCAGATGACACTGAAGGGTTTTCAACTCCACGTAACAGGATGGGTGCAGAAGTAAGTTCTGATGAATCAGATAGGCAGTCAAGGATGAGTCCTTCAGGTTTGTCAACATACTCTGATGGTGCAGTTGAACCAGCATTGACCCCAAATTTGATTACTGAGAGCAGTGAGAATGCATTAGACTTGACTTTGAGTCGCCTGATAATTAAAGAGGATCTTCGCCATTCATCTCCTCCTAGTGTACTGGATGGTGGAATGAATGATACTCTCTATGACCAGCTCGAACAGGCTATGGCTGAGGCTGAGAATGCTACACGAAATGCATACCAAGAAACTTGTAGGCGTGGGAAAGCTGAGAAAGATGCCATTGAAGCTATACGCAGGGTAACTGTTCTGTTGTTGAGTGCTTCTTATACTTCTGCTACGTGTAGATGA 1230 0.4431 MAVVSPVPATTQRTRSMGSVREIGGEIVEEPNPAVVDEPIYVAVAKDVKESKLNLIWAIQNSGGKRICILYVHVPATMIPLMGAKFPASSLKEQEVRAFREIERQDMHKTLDEYLRICQRMGVRAEKLHIEMDSIEKGIIELISQHGIRKLVMGAASDKCYSRRMMDLRSKKAIYVREQAPASCHIQFICKGHLIHTRDRSLGERNAEVASPLVHQVPNSVRSLRSQSITLGQNHWENSTNHAQELFRRVRSANDGLGASTVAASSPDDTEGFSTPRNRMGAEVSSDESDRQSRMSPSGLSTYSDGAVEPALTPNLITESSENALDLTLSRLIIKEDLRHSSPPSVLDGGMNDTLYDQLEQAMAEAENATRNAYQETCRRGKAEKDAIEAIRRVTVLLLSASYTSATCR 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi220g00070 409 Gene3D HUPs 40 176 IPR014729 -
Sebi220g00070 409 MobiDBLite consensus disorder prediction 258 273 - -
Sebi220g00070 409 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 57 157 - -
Sebi220g00070 409 Coils Coil 352 376 - -
Sebi220g00070 409 CDD STK_N 39 192 - -
Sebi220g00070 409 PANTHER OS02G0152300 PROTEIN 40 387 - -
Sebi220g00070 409 MobiDBLite consensus disorder prediction 258 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi220g00070 Sebi-Chr220 1201843 1204299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi220g00070 1 393 U-box Gene Family AT2G45910 41.191 1.68e-86 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi220g00070 - - lja:Lj1g3v2661410.1 619.387