Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi220g00041 ATGGCTTCGAGATATGATTTTATTAAGGATGTTAATGGCAGATCTAAATACAAGATATGGAGGCTGAAAGTAAGGGTTATCCGTTTATGGAGATTTGCTAACTTTCAGGAAAACAACAACAGTAATGTTAAACCAATGATAGAGATGGTGGTTCTTGATGAGCAAAATTTGGTAGAGGGTAATGTGTACATGATATCTAATCTCAATGTTTCTTTGAATTCTGCGAAGTTTAAACCCACTTCACATGAATTCAGAATGTTTTTTAAGAGGGAAACTGAGGTTCGTTTGGTTGAGGATTCCACCATTCCGGTAAATGCTTTCTGTTTTGTTCCATACAATGATATTCTCAATGAAAGTAATGAAGAACGTCATTTAGGTGATGTTGTTGGTCTTCTTTCTGCCAAAGGAGACCTTATTGAGTTTAAAAGAAATGGGAAAGTCTATAACTATTTGGTTATTGAGCTTGATAATCTTGAGGGTGGTCCAAAGCTGAGATGCACTTTGTGGGAAGAATTTGCTCATCAACTTCTTAGGCAGTTGGATGAGGATAACTCTGGTATCCATGTTAGGGTGCTGGATGATACAGATTCTGCTTCTTTCATGCTTTTTGACAAAGAGGCAGCTAACTTCCTCGATTTGTCAGCTTCTGAACTTCGATTGGCTTATATCGCAAGGGGTGGTGATAAGAATTGTCACCCAGAAGAAATTGATGCATTTAAGGAAAAGAAATGTCTTTTTAAAGTAAATGTTAAGATCAAGGGTTTAGATTCTATTGTTCCTTATGTCTTAAATGTCCAGAGGTTATGTTGTGATGAAGATTTAATTGATGCTTTTATAAAGAAGCATAAGCGAGAAGATGTTGTTTTAATGCCTGAAAATTCAGAACTCCTTACTCAAATTGCTGACTCAAATGATGTTTTAAAGGAGAATAACTCCATGTTTGTTGATACCTCTGAAAATAATTTCTTATCTCCAAAATCAAAATCTACTGATGATGGTGTCATGACATCAAAAGAAGTCTCTGCTGGTGTTGGTGAGGTTGCTGCTTTGAATGATCTGGGTGTTGACAAGTTCATAACTCCTGTCAAAAGTTTTGAAGCTAAAGAGTTTTCTTCCAAAAATGTTGTTCCTCTTGCTGAAGATGCTGAGATGTCCTCAAATAAAATCCGGAAGATTATCAAGCAGGAGAAAATTGATTGA 1200 0.36 MASRYDFIKDVNGRSKYKIWRLKVRVIRLWRFANFQENNNSNVKPMIEMVVLDEQNLVEGNVYMISNLNVSLNSAKFKPTSHEFRMFFKRETEVRLVEDSTIPVNAFCFVPYNDILNESNEERHLGDVVGLLSAKGDLIEFKRNGKVYNYLVIELDNLEGGPKLRCTLWEEFAHQLLRQLDEDNSGIHVRVLDDTDSASFMLFDKEAANFLDLSASELRLAYIARGGDKNCHPEEIDAFKEKKCLFKVNVKIKGLDSIVPYVLNVQRLCCDEDLIDAFIKKHKREDVVLMPENSELLTQIADSNDVLKENNSMFVDTSENNFLSPKSKSTDDGVMTSKEVSAGVGEVAALNDLGVDKFITPVKSFEAKEFSSKNVVPLAEDAEMSSNKIRKIIKQEKID 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi220g00041 399 Gene3D - 54 100 IPR012340 -
Sebi220g00041 399 Gene3D - 148 269 IPR012340 -
Sebi220g00041 399 SUPERFAMILY Nucleic acid-binding proteins 187 258 IPR012340 -
Sebi220g00041 399 CDD RPA1_DBD_A_like 21 94 - -
Sebi220g00041 399 SUPERFAMILY Nucleic acid-binding proteins 7 99 IPR012340 -
Sebi220g00041 399 Pfam Domain of unknown function DUF223 50 121 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi220g00041 Sebi-Chr220 655624 658177 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi220g00041 60 182 Core DNA Replication Machinery Family AT2G06510 30.159 9.56e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi220g00041 - - aip:107647757 200.29