Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi220g00018 ATGAACCTGGATATGGCTTGTAGTTTGTCACAGTCAAAAATGTTAAACGGAGGTGTGGAGACAAGTTTCAGACACGGATCAGTTGGTCAAGTAGGTCGTTTTGATTTTAGAGGAAGAGGTTTTGGTTATGCATTTCTGGCCAACTCAAGAAATACTCTGAGATTGCGTTTTAGTGGGATGAACAGAGTTAGTGGTGTTTCTGCTTGTTGGAATAATCCAAGAGTGGTTTCTGGTGGCGAGTTTAAAGTTTTGAATACAAAGAGAAGTATGTGTTGTAAGAATAATAATCTTTTTATGGGGTCTAGAGTAATTTGGTCAAAGTGTCAGGGGAATGATTCTATAGCTTATGTTAATGGCAATGGCCGCAATGTTGATTATGTGGAAGGTTCAGGTGAGGATGTAGGGCTTGGGTCCGTTTCTAGTACTGAACTGGATGCATCATCGGAAGAAAAGAAAGGGCTAGCTGGGACAGAAGGAGGGAGTGAAATAGGAGTAGAGGAACAAAGTGTGGATGAACTGAAAGAACTGTTGCAAAAGGCCTTGAAGGAACTAGAAGTTGCACAAATAAATAGTACTATGTTTGAGGAAAAGGTTAAAAAAATATCAGAGACTGCCATTTTTTTGCATGATGAAGCAGCCCGTTCTTGGAATGATGTTAATTCTGCTCTTGACACCATTCAAGAAATTTCAAATGAAGAAGTTATGGCCAAAGAAGCTGTCCAAAATGCAACTATGGCTCTTTCATTAGCCGAGGCAAGGCTTCAAGTAGCCCTAGAATCTTTGGAGGTTGCAAAAGAAGTTCCTGATTCAGAGCAAGGTTCTAATAATGAGAGCAATGGTGATAAAGGCATAACGGAAGCAGAGAAAGCACTTTTCATTGCCCAAGAAGATATTAAGGAATGCCAGGCAAATTTAGCCAATTGTGAGGTCGAGCTGAGGCGCTTGCAAAATAGAAAGGAGGAGTTGCAGAAGGAAGTGAGCAAATTGCAAGAAGTTGCTGAAAAGGCACAGCTGAATGCAGTGAAAGCTGAGGAGGATGTTACAAACATAATGCTTTTAGCGGAGCAAGCTGTTGCCTTTGAACTTGAGGCTACACAACGTGTAAATGATGCTGAGATTGCCTTACAGAGAGCAGATAAGTCTGTTTCTAATTTGAATGCTGATACCGCAGAAACTATTACAATTCAAGATGCTGAGCCTGTTCCTGAAGAGGAGAAAGTGGCTCAAGGTCTTTCTGGTGATGTCACTGTTGAAAGAGATAGAGATGTGGCAAATGATGATGAATCTTTGCTTGCCAAATTATCACCTGAAACACTATCTGATAAAACCAGCCAAGTCTCAGAAGACATTACACAGTCTGAATATTTGAGTGATAATGAGAATGCTGTACAAACAAAAAAGCAGGAAACACAGAAAGATTTGACTAGAGATAGTTCACCCTTTGCTCCCAAGGCATTACTAAAGAAGTCTTCTCGATTCTTTTCTGCATCATTCTTCTCTTTTACTGAAGATGAAGCTGAGTCCACACCGGCATCAGTTTTCCAAGGCCTCGTGTTATCTGCAAAGAAGCAGTTGCCCAAGCTTGTTCTTGGGTTGTTGTTAATGGGAGCAGGGGTTGCGTTCTATGCCAATAGGGCAGAGAGGAATTCTCAGCTGCTTCAACAGGCAGATGTTATTGTGACTAGTGTGGAAGAAGTTTCCTCTAGTGCAAAGCCTCTGGTTAGACGACTTCAGAAACTCCCTAAGAAAATTAAGAAAATCATTGCGTCATTACCTCATCAAGAGGTGAATGAGGAAGAAGCTTCCCTCTTTGACATGCTCTGGTTATTACTTGCAAGTGTTATATTTGTTCCAATATTTCAAAAAATCCCTGGAGGCAGTCCTGTTCTTGGCTACTTGGCTGCTGGTATCTTGATTGGGCCTTATGGTCTCTCCATTATTCGTCATGTTCATGGGACAAAAGCAATAGCCGAATTTGGAGTTGTTTTCCTTTTATTCAATATTGGCCTGGAGCTCTCTGTTGAAAGACTTAGTTCGATGAAGAAATATGTTTTTGGATTAGGCTCTGCACAGGTTTTAGCAACTGCTGTAGTTGTTGGCTTGGTGGCTCATTATATTTGTGGCCAACCTGGCCCTGCTGCTATTGTCATTGGGAATGGCCTGGCATTATCATCTACTGCTGTTGTCCTGCAGCTTGACCTTAGGTTGTGA 2211 0.4147 MNLDMACSLSQSKMLNGGVETSFRHGSVGQVGRFDFRGRGFGYAFLANSRNTLRLRFSGMNRVSGVSACWNNPRVVSGGEFKVLNTKRSMCCKNNNLFMGSRVIWSKCQGNDSIAYVNGNGRNVDYVEGSGEDVGLGSVSSTELDASSEEKKGLAGTEGGSEIGVEEQSVDELKELLQKALKELEVAQINSTMFEEKVKKISETAIFLHDEAARSWNDVNSALDTIQEISNEEVMAKEAVQNATMALSLAEARLQVALESLEVAKEVPDSEQGSNNESNGDKGITEAEKALFIAQEDIKECQANLANCEVELRRLQNRKEELQKEVSKLQEVAEKAQLNAVKAEEDVTNIMLLAEQAVAFELEATQRVNDAEIALQRADKSVSNLNADTAETITIQDAEPVPEEEKVAQGLSGDVTVERDRDVANDDESLLAKLSPETLSDKTSQVSEDITQSEYLSDNENAVQTKKQETQKDLTRDSSPFAPKALLKKSSRFFSASFFSFTEDEAESTPASVFQGLVLSAKKQLPKLVLGLLLMGAGVAFYANRAERNSQLLQQADVIVTSVEEVSSSAKPLVRRLQKLPKKIKKIIASLPHQEVNEEEASLFDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLATAVVVGLVAHYICGQPGPAAIVIGNGLALSSTAVVLQLDLRL 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi220g00018 736 Coils Coil 163 190 - -
Sebi220g00018 736 MobiDBLite consensus disorder prediction 136 161 - -
Sebi220g00018 736 MobiDBLite consensus disorder prediction 436 464 - -
Sebi220g00018 736 Coils Coil 284 346 - -
Sebi220g00018 736 Gene3D - 599 733 IPR038770 -
Sebi220g00018 736 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 204 732 - -
Sebi220g00018 736 Pfam Sodium/hydrogen exchanger family 609 731 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Sebi220g00018 736 Coils Coil 368 388 - -
Sebi220g00018 736 MobiDBLite consensus disorder prediction 397 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi220g00018 Sebi-Chr220 295338 299753 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi220g00018 90 732 Inorganic Solute Cotransporters AT4G00630 57.927 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi220g00018 K03455 - gmx:100798822 1049.65