Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi220g00017 ATGCTCCTTGTTAAAAGGATCTCATCTGGGTTCAATATATACAGTCAGGTGTTGCAGGAGAGAGGTGAGAGCACATCACGGCATGGACGAGCTACATTTTCTGTTTTACTTTTTCAGAGATCCTCTACAAGCATCCTCTACTTTGTTGCTCTATCTGGTCAATTGTTGTGTGAATTTGCCATTTCTGATGATTTGGCTGTTGTCGTCTTATTAATCCTCATACCCCTAATTTCACCTAGTTCTTCCAAAGGAGGGGTTGGTTTTCAAGCCATTGCTGAAGCTCTTGGACTGGCTGCTGTTAAGGCAGCAGTTGCCATCACTGCCATAATTGCAGGTGGACGATTGCTCCTTCGACCAATATACAAGCAGGTTGCAGAAAATCAAAATGCAGAAATATTCTCAGCCAATACACTCCTTGTTATTCTTGGGACTAGTCTTCTTACAGCCAGGGTTGAATCTGATATTGCTCCATATCGTGGCCTTCTTTTGGGGCTATTCTTTATGACGGTAGGAATGTCAATCGATCCAAAACTTTTTGTTTCAAACTTCCCAGTCATTGCAGGGACATTGGGACTCTTAATATGTGGCAAGACTATCTTGGTTTCTTTGATGGGTAGAATCTTTGGGATTTCCCTTATTCCTGCCATTAGAGTTGGTCTTCTTCTTGCTCCTGGTGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTAGCCAGCTCTCGTCTTTGCTGTTTCTTGTTGTGGGGATTTCAATGGCTATCACGCCATGGCTAGCTGCAGGAGGCCAGCTGATTGCTTCCCGTTTTGAGCAGCATGATGTTAGAAGTTTATTACCTGTAGAAAGTGAGACTGATGATCTGCAAGATCATATCATTATTTGTGGATTTGGACGAGTAGGCCAGATCATTGCGCAACTTCTTTCTGAGCGACTTATTCCGTTTGTTGCACTGGATGTGAGAGGTGATAGAGTGGCAATTGGGCGAGCCCTGGATCTCCCTGTGTACTTTGGAGATGCTGGTAGTCGAGAGGTCTTACATAAGATTGGGGCTGAAAGGGCATGTGCTGCAGCAATAACTTTAGATACACCTGGATCAAATTATAGAACAGTTTGGGCTCTGAGCAAGTACTTCCCAAATGTGAAGACTTTTGTTCGTGCCCATGACGTTGATCATGGATTGAATTTGGAAAAGGCTGGAGCTACTGCTGTTGTCCCAGAGACCTTGGAACCAAGTCTTCAACTAGCAGCTGCTGTGCTTGCTCAGGCTAAACTCCCCACATCAGAGATTGCAGCAACTATAAATGAATTCAGATGCCGTCATCTGGCTGAGCTCACAGAGCTGTGTGAAGCAAGTGGAAGTTCTCTTGGTTATGGATATACTAGAATTATGAGCAAACCCAAGTCTCAATCCCCAGATTCATTGGACGAGACCCAAGTCTCTGAAGGGAAACTGGCAATATGA 1479 0.4422 MLLVKRISSGFNIYSQVLQERGESTSRHGRATFSVLLFQRSSTSILYFVALSGQLLCEFAISDDLAVVVLLILIPLISPSSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARVESDIAPYRGLLLGLFFMTVGMSIDPKLFVSNFPVIAGTLGLLICGKTILVSLMGRIFGISLIPAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMAITPWLAAGGQLIASRFEQHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRGDRVAIGRALDLPVYFGDAGSREVLHKIGAERACAAAITLDTPGSNYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIAATINEFRCRHLAELTELCEASGSSLGYGYTRIMSKPKSQSPDSLDETQVSEGKLAI 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi220g00017 492 ProSiteProfiles RCK N-terminal domain profile. 296 418 IPR003148 GO:0006813
Sebi220g00017 492 MobiDBLite consensus disorder prediction 471 492 - -
Sebi220g00017 492 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 293 434 IPR036291 -
Sebi220g00017 492 Pfam Sodium/hydrogen exchanger family 153 264 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Sebi220g00017 492 Gene3D - 6 272 IPR038770 -
Sebi220g00017 492 Pfam TrkA-N domain 297 410 IPR003148 GO:0006813
Sebi220g00017 492 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 63 482 - -
Sebi220g00017 492 FunFam K(+) efflux antiporter 2 chloroplastic 292 456 - -
Sebi220g00017 492 Gene3D - 292 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi220g00017 Sebi-Chr220 279566 288733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi220g00017 16 488 Inorganic Solute Cotransporters AT1G01790 80.282 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi220g00017 K03455 - gmx:100818163 750.74