Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi21g00086 ATGTCCGTTGGCGAACTTGTAGAGCTTGCCAAGGTTGATCCTAAGCGTCTTGAAAGGTCTCAAGTTGGTTGGTTGGCAATGGATAACAACAAACTCCCTTATGTTACTTCAACACCAAACCTGAATGTGAAATCAAAACAACCATTATCGTCATCATCATCGTATCCTCCACCAACAATTCTAGCTACAACCCTAGACTCAACTAGCTTGAACAATGATATTAGTGAGATGTCTAATAATCCTCCTGGAAATACAAGCCACAAGCGCGCTCGATCTGAGATTTTCACCCTCCCTAAAGATATCAACATCGAAGGTGATATTGACACTATGGATGGCCTCTCACTTTTTGATGATACCGTTAAGGAAGACTTGTTTTCCGTCTACCTCAATATGAATAAACTAAACCCATCCTCTGGAGCCCATGATACTGTTATAGAAAACTTTGCTATTGATATTGGTAATACCACTATTAATGAAAGGCTCAAGGTTGGGCACCAACACAGTCAGCCCATAAATGGATCAACATCCATCATGAAACCTGACATTCCGGTTTCTACTTCTGAAAATGGATTTGTGATTGTCTCAAGGAAAGCAATGTCCGCTGGCGAACTTGTAGAGCGCGCCAAGGTTGATCCTAAGCATGCTGAAAGGTGTCAAGTTGGTTTGTTGGCAATGGATAACAATAAACTCCCTTATGTTACTTCAACACCAAACCTGAATGTGAAATCGAAACAACTATTATCGTCATCATCATCGTATCCTCCACCAACAATTCTAGCTACAACCCCAGACTCAACTGGCTTGAAGAATGACATTAGTGAGATGCCTGATAATCCTCTTGGAAATACAAGCCACAAGCGCGCTCGATCTGAGATTCTCACCCTCCCTGCAGATATCAATATCGATAGTGATATTGACCCCATGGATGGCCTCTCACTTTTTGATGACACCGTCAATGGAGACTTGTTTTCCGCCTACCTCAATATGGATAAACTAAACCCATCCTCTGGAGCCCATGCTACTGTTGTAGAAAACTTTGCTATTGATATTGGTAGTACCAATATCAGTGAAAGGCTCGAGGTTGGGCACCGACATAGGCAATCCATAAATGGATCAACATCCACCATCAAACCTGACATTCCAGTCTCTGCTTCTGAAAATGGCTCTATGATTGCTTCAAGGAAAGTAATGTCCGGTGCCGAACTTGTAGAGCTTGCAAAGGTTGATCCTAAGCGTGTTGAAAGGATATGGGCAAATAGACAGTCTGTTGCAAGATCAAAGGAAAAGAAGACACGTTACATTTTTGAGCTTGAAAATAAGGTTCAAAAATTGGAAACTGAAGTTACATCCTTGTCTACACAATTAACTATCTTGCAAAGGGATACACAAAGAATGGCTACTAAGAATGATGAGTTAAGGTTGCAGTTGGAAACCAAGCGACAACAACTTCAATTGCAAAATGGCCCTAAAGATTTTATAAACGTCATTTTGAGGAGGAGGGAATGA 1506 0.413 MSVGELVELAKVDPKRLERSQVGWLAMDNNKLPYVTSTPNLNVKSKQPLSSSSSYPPPTILATTLDSTSLNNDISEMSNNPPGNTSHKRARSEIFTLPKDINIEGDIDTMDGLSLFDDTVKEDLFSVYLNMNKLNPSSGAHDTVIENFAIDIGNTTINERLKVGHQHSQPINGSTSIMKPDIPVSTSENGFVIVSRKAMSAGELVERAKVDPKHAERCQVGLLAMDNNKLPYVTSTPNLNVKSKQLLSSSSSYPPPTILATTPDSTGLKNDISEMPDNPLGNTSHKRARSEILTLPADINIDSDIDPMDGLSLFDDTVNGDLFSAYLNMDKLNPSSGAHATVVENFAIDIGSTNISERLEVGHRHRQSINGSTSTIKPDIPVSASENGSMIASRKVMSGAELVELAKVDPKRVERIWANRQSVARSKEKKTRYIFELENKVQKLETEVTSLSTQLTILQRDTQRMATKNDELRLQLETKRQQLQLQNGPKDFINVILRRRE 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi21g00086 501 SUPERFAMILY Leucine zipper domain 411 465 IPR046347 GO:0003700|GO:0006355
Sebi21g00086 501 MobiDBLite consensus disorder prediction 246 269 - -
Sebi21g00086 501 Pfam Basic region leucine zipper 408 459 IPR004827 GO:0003700|GO:0006355
Sebi21g00086 501 CDD bZIP_plant_RF2 412 463 IPR044759 GO:0003700|GO:0006355
Sebi21g00086 501 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 53 217 - -
Sebi21g00086 501 Coils Coil 427 461 - -
Sebi21g00086 501 Gene3D - 410 464 - -
Sebi21g00086 501 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 409 472 IPR004827 GO:0003700|GO:0006355
Sebi21g00086 501 SMART brlzneu 407 471 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi21g00086 Sebi-Chr21 2101487 2107469 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi21g00086 232 493 bZIP Transcription Factor Family AT1G06070 45.683 1.22e-64 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi21g00086 bZIP_2 5.3e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi21g00086 - - pcin:129313665 226.098