Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi21g00084 ATGTCTAATAATCCTCCTGGAAATACAAGCCACAAGCGCGCTCGATCTGAGATTTTCACCCTCCCTAAAGATATCAACATCGAGGGTGATATTGACACTATGGATGGCCTCTCACTTTTTGATGTCACCGTTGAGGAAGACTTGTTTTCTGTCTACCTCAATATGAATAAACTAAACCCATCCTCTAGAGCCCATGATACTGTTGTAGAAAACTTTGCTATTGATATTGGTAATACCACTATTAATGAAAGGCTCAAGGTTGGGCACCAACATAGCCAGCCCATAAATGGATCAACATCTATCATGAAACCTGACATTCCAATTTCTACTTCTGAAAATGGATTTGTGATTGACTCAAGGAAAGCAATGTCTGCTGGCGAACTTGTAGAGCGCGCCAAGGTTGATCCTAAGCATGCTGAAAGTACCAATTTCAATGAAAGGCTCGAGGTTGGGCATCGACATAGCCAATCCATAAATGGATCAACATCCACCATCAAACCTGACATTCCGGTCTCTGCTTCTGAAAATGGCTCTATGATTGCTTCAAGGAAAGTAATGTCCGCTGCCGAACTTGTAGAGCTTGCAAGGGTTGATCCTAAGCGTGCTGAAAGGATATGGGCAAATAGACAGTCTGCTGCAAGATCAAAGGAAAAGAAGACACGTTACATTTTTGAGCTTGAAAATAAGGTTCAAAAATTGGAAACTGAAGTTACATCCTTGTCTACACAATTAACTATCTTGCAGAGGGATACACAAAGAATGGCTACTAAGAATGATGAGTTAAGGTTGCAGTTGCAAACCAAGCGACAACAACTTCAATTGCAAAATGCATTGAAGAACCCATCTGGAGAGGAAATCCGACATTTGCCACTACTAATTGGGCAAGCTATGCCAAATGGAGGACCTATGAACTCTGTTGCATTTGGAAGGGGGCAACAATACTCTCCTAATACACTGGACACATATGCTCTTTTAGCAGCACAACAGTTACAACAACCTCAAAGTCATTCCTAG 1014 0.4162 MSNNPPGNTSHKRARSEIFTLPKDINIEGDIDTMDGLSLFDVTVEEDLFSVYLNMNKLNPSSRAHDTVVENFAIDIGNTTINERLKVGHQHSQPINGSTSIMKPDIPISTSENGFVIDSRKAMSAGELVERAKVDPKHAESTNFNERLEVGHRHSQSINGSTSTIKPDIPVSASENGSMIASRKVMSAAELVELARVDPKRAERIWANRQSAARSKEKKTRYIFELENKVQKLETEVTSLSTQLTILQRDTQRMATKNDELRLQLQTKRQQLQLQNALKNPSGEEIRHLPLLIGQAMPNGGPMNSVAFGRGQQYSPNTLDTYALLAAQQLQQPQSHS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi21g00084 337 Coils Coil 258 278 - -
Sebi21g00084 337 Gene3D - 199 252 - -
Sebi21g00084 337 SMART brlzneu 196 260 IPR004827 GO:0003700|GO:0006355
Sebi21g00084 337 CDD bZIP_plant_RF2 201 252 IPR044759 GO:0003700|GO:0006355
Sebi21g00084 337 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 4 139 - -
Sebi21g00084 337 MobiDBLite consensus disorder prediction 151 171 - -
Sebi21g00084 337 MobiDBLite consensus disorder prediction 154 171 - -
Sebi21g00084 337 Pfam bZIP transcription factor 200 258 IPR004827 GO:0003700|GO:0006355
Sebi21g00084 337 Coils Coil 216 250 - -
Sebi21g00084 337 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 198 261 IPR004827 GO:0003700|GO:0006355
Sebi21g00084 337 SUPERFAMILY Leucine zipper domain 200 251 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi21g00084 Sebi-Chr21 2047029 2051205 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi21g00084 1 337 bZIP Transcription Factor Family AT2G31370 41.813 1.19e-70 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi21g00084 bZIP_1 5.1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi21g00084 - - cit:102629290 238.424