Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi21g00068 ATGTCGAAGATAGTATGCGTGACTGGGGGCAGTGGATGCATTGGTTCATGGCTGGTTCATCTCCTTCTGGATCGTGGATACACCATTCACGCTACCGTTCAAAATCTCAACGATGAGACCGAGACGAAGCATCTAGAAGCCCTCGAAGGAGCATCCACCCGCCTCCGCCTCTTCCAGATCGACCTCCTCCGCTACGACACCATCCTCGCCGCCGTCCGCGACTGCTCCGGCGTTTTCCACCTCGCTTCCCCTTGCATTGTCGACCAAGTCCATGACCCTCAGAATGAGCTTCTGGACCCGGCGATTAAAGGGACCGTGAACGTGCTTTCGGCTGCGAAGGAAGCTGGGGTTCAGCGCGTGGTGGTCACTTCCTCAATCTCCGCAATTTCCCCGAGCCCTAGTTGGCCTTCTGATGTTGTCAAGAGAGAGGATTGCTGGACTGACATTGAATATTGCAAGCAAAAGGGGTTGTGGTATCCAATGTCCAAGACATTGGCTGAGAAAGCTGCTTGGGATTTTGCCAAGGAGAATGGTTTGGATGTTGTGGTGGTGAATCCTGGTACTGTGATGGGCCCTGTTATTCCACCAAGGCTCAATGCAAGCATGCTCATGCTTGTTCGACTTCTTCAAGGCTGCACTGAAACATATGAGGACTTTTTTATGGGATCGGTTCACTTTAAAGATGTTGCATTGGCACATATTTTGGTGTATGAGAACAAAGCAGCAACTGGTAGACATTTGTGTGTTGAAGCTATCTCTCACTATGGTGACTTTGTGGCAAAAGTTGCTGAACTATATCCAGAATATAATGTTCCGCGGGTGCAACGAGATACCCAACCAGGACTGTTGAGGGCAAGGGATGGATCAAAGAAACTCATGGATTTGGGTTTGGAATTCATTCCAATGGAGCAAATTATTAAGGATGCTGTAGAGAGTTTGAAGAACAAAGGGTTCATTTCTTGA 963 0.4891 MSKIVCVTGGSGCIGSWLVHLLLDRGYTIHATVQNLNDETETKHLEALEGASTRLRLFQIDLLRYDTILAAVRDCSGVFHLASPCIVDQVHDPQNELLDPAIKGTVNVLSAAKEAGVQRVVVTSSISAISPSPSWPSDVVKREDCWTDIEYCKQKGLWYPMSKTLAEKAAWDFAKENGLDVVVVNPGTVMGPVIPPRLNASMLMLVRLLQGCTETYEDFFMGSVHFKDVALAHILVYENKAATGRHLCVEAISHYGDFVAKVAELYPEYNVPRVQRDTQPGLLRARDGSKKLMDLGLEFIPMEQIIKDAVESLKNKGFIS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi21g00068 320 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 310 - -
Sebi21g00068 320 Pfam NAD dependent epimerase/dehydratase family 5 244 IPR001509 -
Sebi21g00068 320 CDD FR_SDR_e 5 297 - -
Sebi21g00068 320 Gene3D - 1 320 - -
Sebi21g00068 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 314 IPR036291 -
Sebi21g00068 320 FunFam Cinnamoyl-CoA reductase 1 1 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi21g00068 Sebi-Chr21 1524753 1526938 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi21g00068 3 320 Monolignol Biosynthesis Gene Families AT5G58490 77.358 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi21g00068 - - gmx:100803241 578.556