Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi21g00060 ATGGGATACACTTCATTGCTTAGAAGTCCAAAGAAAGAAGAACAAGAAGTACCAGATACTATCACCCCTATACTACCCAATTCATCAAATGAAGCTTATGCTGATGAAGATTTCAATATTTTGGACGAACTTGAAGGGGTCTTGAACAGTACTACTGAGGAAGAACAAAAGTTACTACCACAAAACACTTGTAGTGGTCAGTTTCAATGGGATTTCATGGAATGGGAGAAATTCTCCCCTGTTGGAGAGGAAGCAGAGGAACATCAGGCAACAGAGAACAGAAGCAAATGCATGTTAGAGGAGCAGCAAATAATAAAGAGAGAAAATAATGATGTTGGGTTTTGGGAAGTGGATGATGAAAAGATGATGGCTTTGAATTTGAATTTGAACTATCAAGAGGTTTTGGATGCTTGGTCAGATCGTGGGTCTCTATGGGCTGATGACTGTTCTCTTTCATTGGCATCTAATAATAATGGTTACTATATGGGAGAAGTGCCAATATTGGAAGAAGAGAGAACAAGAAGGGAAGCAAGTGTTCTAAGGTACAAGGAGAAACGCCAGAACAGGTTGTTCTCAAAGAAGATAAGATACCAAGTTCGGAAATTAAACGCTGATAAAAGACCCAGAATCAAGGGTCGCTTTGTGAAGAGACATTGA 657 0.3942 MGYTSLLRSPKKEEQEVPDTITPILPNSSNEAYADEDFNILDELEGVLNSTTEEEQKLLPQNTCSGQFQWDFMEWEKFSPVGEEAEEHQATENRSKCMLEEQQIIKRENNDVGFWEVDDEKMMALNLNLNYQEVLDAWSDRGSLWADDCSLSLASNNNGYYMGEVPILEEERTRREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKRH 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi21g00060 218 Pfam CCT motif 175 217 IPR010402 GO:0005515
Sebi21g00060 218 ProSiteProfiles CCT domain profile. 175 217 IPR010402 GO:0005515
Sebi21g00060 218 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 13 217 - -
Sebi21g00060 218 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi21g00060 Sebi-Chr21 1434605 1435742 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi21g00060 118 217 C2C2-CO-like Transcription Factor Family AT1G73870 46.610 2.52e-21 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sebi21g00060 CCT 2.2e-19 CL0281