Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi21g00053 ATGGCCACAGACGCGAGGGCCAAATTCCAGAACCCGGATTTCCGACCCGATTTCCATCCGGACTTAACGGTGTCAACTCACGACGGCCTCCACTTCTGGCAGTTCATGATCGCCGGATCTATCGCCGGTTGCATTGAACACATGGCAATGTTCCCCGTTGACACCGTTAAGACCCACATGCAAGCCCTCGGTTCTTGCCCTATCAAATCCGTTACGGTCCGTCAAGCCTTCCGTTCCATTCTTCAATCGGAGGGTCCCTCCGCTTTCTACCGCGGCATCGGAGCCATGGGTCTCGGTGCTGGACCTGCTCACGCCGTTTATTTCTCCGTCTATGAGACCTGCAAGAAGCGATTCTCAGATGGGAACCCGAATAACGCCGTTGCTCACGCCGCTTCTGGCGTCTGCGCAACCGTCGCGAGCGACGCCGTTTTCACGCCGATGGATATGGTTAAGCAGAGGCTGCAGCTGAGTAACAGCGGGTATAAGGGTGTATGGGATTGTGTGAGGAGAGTTATGAGTGAGGAAGGGTTTGGAGCGTTCTACGCGTCGTATAGGACAACGGTTTTGATGAATGCGCCGTTCACGGCGGTGCATTTCGCCACCTATGAGGCGGCGAAGCGGGGACTCATGGAGGTGTCGCCGGATAGCGTTGACGATGAACGGTTCAAAAGCGGTTCAATTGGGGATGTTGTTAAAACAATAGTAAAAAAGGATGGATACAGAGGGCTCATGCGAGGATGGATTCCAAGGATGCTCTTTCATGCTCCTGCAGCTGCTATTTGTTGGTCTACATATGAAGCTGGAAAGTCCTTTTTCCAAGATTTCAATCAGCAGAAAGATACTGGCACTGTCACCTAA 858 0.5291 MATDARAKFQNPDFRPDFHPDLTVSTHDGLHFWQFMIAGSIAGCIEHMAMFPVDTVKTHMQALGSCPIKSVTVRQAFRSILQSEGPSAFYRGIGAMGLGAGPAHAVYFSVYETCKKRFSDGNPNNAVAHAASGVCATVASDAVFTPMDMVKQRLQLSNSGYKGVWDCVRRVMSEEGFGAFYASYRTTVLMNAPFTAVHFATYEAAKRGLMEVSPDSVDDERFKSGSIGDVVKTIVKKDGYRGLMRGWIPRMLFHAPAAAICWSTYEAGKSFFQDFNQQKDTGTVT 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi21g00053 285 PANTHER MITOFERRIN-1-RELATED 223 275 - -
Sebi21g00053 285 Gene3D Mitochondrial carrier domain 213 285 IPR023395 -
Sebi21g00053 285 Gene3D Mitochondrial carrier domain 8 212 IPR023395 -
Sebi21g00053 285 FunFam Mitochondrial RNA-splicing protein MRS3 11 158 - -
Sebi21g00053 285 ProSiteProfiles Solute carrier (Solcar) repeat profile. 30 117 IPR018108 -
Sebi21g00053 285 Pfam Mitochondrial carrier protein 30 120 IPR018108 -
Sebi21g00053 285 Pfam Mitochondrial carrier protein 223 274 IPR018108 -
Sebi21g00053 285 Pfam Mitochondrial carrier protein 125 211 IPR018108 -
Sebi21g00053 285 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 208 IPR018108 -
Sebi21g00053 285 SUPERFAMILY Mitochondrial carrier 28 266 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi21g00053 Sebi-Chr21 1316136 1318760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi21g00053 1 281 Chloroplast and Mitochondria Gene Families AT1G07030 64.939 4.22e-151 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi21g00053 K15113 - gmx:100802640 534.258