Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi21g00047 ATGTGCAGCTTTGTGTTACTCGCAAAGAAATGGCAACTGTCAAGGAGCCTCATGTTGAAAGCTCATGTGGGATTTTTGGTTTTGATGCTCACTTCTGTTTACTCCTTTTTCTATGACAAGGAAGTGAACGGAAATTCAGATGTATTAGGCTTGATTTCATGTGCTGCGTTTGCTTTGATGTCGTTTAGTTTGTCAAGACAAATTGACCTTGGATTTGAGGTAGATCTGCTTAATTTTTTCCTAGGATGTCTTACAGTGCAGCTGATGAAGATTAACTTGATGTTAGCTTTTCTTGGGGCAGTCTTGTGTTATTTCCTTATCATTCTTCGGTCTTCTTTAGATTCTCAACATGACATTGGGAATGTTGGTGCCAATGCCACCCACCATGTAGCCATAGAAATTGATACCGCAAGTAGTTTAGAAGTAGGAGCTGATCATGGCAACGACAGTGAGCTCCAATCTGAATTTAACAATCACTGTCAAGAATTACCCTTATTACGCAAAAGGCATTTTGTCACAACTGTTCCAAATGAGATGTATCTGAGGAATACCTTAGCTTCTTACCGAACAACTTCTAATGCTGCAACACACATACAAGCTGAATTTAGAGAACACACACTGAAGGAGATAAAGGAATTTCAGTTTTCCAATCCAGAGGCTGAAGCACGCAAGATTGTTGCAGCCATGAAGATTCAACATGCCTTTCGTAATTATAAGACAAGGAAGATGACTGAAGCTGCTACTCGCATCCAGCGTAACTTCCGCAAATGGAAGATCTCTAAAGAATCTACCTACACGCGTCAGCAGGCTATTAAAATTCAAGTAAAAATTACTCTTCCTTCCTCCTCTGCTATTGCTAATTGGCTGATTGCCTGA 876 0.4018 MCSFVLLAKKWQLSRSLMLKAHVGFLVLMLTSVYSFFYDKEVNGNSDVLGLISCAAFALMSFSLSRQIDLGFEVDLLNFFLGCLTVQLMKINLMLAFLGAVLCYFLIILRSSLDSQHDIGNVGANATHHVAIEIDTASSLEVGADHGNDSELQSEFNNHCQELPLLRKRHFVTTVPNEMYLRNTLASYRTTSNAATHIQAEFREHTLKEIKEFQFSNPEAEARKIVAAMKIQHAFRNYKTRKMTEAATRIQRNFRKWKISKESTYTRQQAIKIQVKITLPSSSAIANWLIA 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi21g00047 291 ProSiteProfiles IQ motif profile. 227 253 IPR000048 GO:0005515
Sebi21g00047 291 Gene3D - 190 243 - -
Sebi21g00047 291 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 164 274 - -
Sebi21g00047 291 Pfam IQ calmodulin-binding motif 227 242 IPR000048 GO:0005515
Sebi21g00047 291 Pfam IQ calmodulin-binding motif 244 259 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi21g00047 Sebi-Chr21 1130933 1132164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi21g00047 174 275 CAMTA Transcription Factor Family AT3G16940 51.429 2.77e-19 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi21g00047 - - cam:101500062 334.724