Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi21g00045 ATGGACCTCAGCTGTTCTCAACACTTGATTGAGCTTCCAGATTTCTCCATGGCAATAAATCTTCAAAGCATTAACCTCTTTGGATGTGTAAGTCTAAGCCATGTTCACCCATCTATTTTATCTCTCAAAAAGCTTGTCAACTTAAACATGGTTTGGTGCAAAAAATTAAAGAGTCTTTTAAGCAATGCCCCTTTAAGATCTCTCAGAATTCTTGAGCTATATGGCTGCTCAAGTCTTGAGGAGTTTTCAGTGACATCTGAAGAAATGACATATTTGGATTTAAGAAATACTGCTATTAATGAGTTGCCAGCATCAATTAAGCACCTTGGTAATCTTATGAACTTGGAGCTAAGTTGTTGCGGGTATCTTAGGAATCTTCCAAATGAGTTCTCATGCCTGAGATCACTTGGCCGGTTGGTACTTTCTGATTGCAGAAAACTTGACACATCAAATCTGCATTTTCTATTTGATGGCCTCCGTTCATTAGGATATCTGTGTCTAGACAATTGTGGTAACCTAACTGAACTCCCTGACAACATCAGTTTGTTATCATCATTGTATTATTTATCACTAAGTGGAAGCAATGTGGAGAACATGCCTGCAAGCATCAAACATCTTTCACAGCTAGAGTCTCTTGACTTGTGCAAATGCATGAGGCTTCAATCTTTACCAGAACTCCCACCATCCATTGAAGTGTTGGATGTCACTAATTGCACCTCCTTGGAGACAGTGCTCACCTCTCCTGTTATTGATGAACTACTACAAGAGCACAAGGTATTCATTTCATTCAAAAATTGTGTGAATTTGAGTGAATATTCCCGCAATGTTATTATGACAGATGCCCATGTCAGAATAAAGGAGGTAGCATATGTTCATGTTTCAGCCAAAATAGAAAGGAGTGACCCCTATTACTTTTTCAAATCAGAGGTGATGTCTTCTTATCATCACCCACCAACTGTTATTTACCCAGGAAGTAGAGTTCCAGAGTGGTTTCATTATCGGTCAACTAAACCATCCATCACAATTGAACTTTTACATTCTCCACAATCCAACATATGTGGTTTCATATTCTGCCTCATTCTTCCTCCATCCCCATCAAATGAAAATAATTGCAATTGGAAAATTGGATGTGAATGCTACTTGGAAAGTGGTGAAAAGATTAGAAACACAAGTATGTGCTCTTTTGCAACAGGACTGGTTTCAGATCATGTGTACTTGTGGTATGATGAAAACTTCTGTCTTGAGATGTTTAATACAATTGATGAAAATAGAATTGATGACCAGTACACCTCTTACAATCCAAAGCTTTCATTTGAATTCTTTGTTGAGACTGAGGATAAGTTGAATGTGGTCATTAAAGAGTGTGGGATCTGCCAAATAAATGGTTCAGAATATCTCAATTTTGTTGAACAATTGGGATCTGAGTTGGAGTTGGGAAATAAAATAAAGAGAGGCAGGGATATTTATGAATTAGAATCATGTGAAAGAGGCACTCAAGTTCAAGGCTTTTATGAGGAAGAAGATGAACAAGAATATTCATTTCATCAAACAAAGAAACAGAAGGTGTTCTTTGACTTCTAA 1581 0.3738 MDLSCSQHLIELPDFSMAINLQSINLFGCVSLSHVHPSILSLKKLVNLNMVWCKKLKSLLSNAPLRSLRILELYGCSSLEEFSVTSEEMTYLDLRNTAINELPASIKHLGNLMNLELSCCGYLRNLPNEFSCLRSLGRLVLSDCRKLDTSNLHFLFDGLRSLGYLCLDNCGNLTELPDNISLLSSLYYLSLSGSNVENMPASIKHLSQLESLDLCKCMRLQSLPELPPSIEVLDVTNCTSLETVLTSPVIDELLQEHKVFISFKNCVNLSEYSRNVIMTDAHVRIKEVAYVHVSAKIERSDPYYFFKSEVMSSYHHPPTVIYPGSRVPEWFHYRSTKPSITIELLHSPQSNICGFIFCLILPPSPSNENNCNWKIGCECYLESGEKIRNTSMCSFATGLVSDHVYLWYDENFCLEMFNTIDENRIDDQYTSYNPKLSFEFFVETEDKLNVVIKECGICQINGSEYLNFVEQLGSELELGNKIKRGRDIYELESCERGTQVQGFYEEEDEQEYSFHQTKKQKVFFDF 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi21g00045 526 Gene3D Ribonuclease Inhibitor 1 87 IPR032675 -
Sebi21g00045 526 Gene3D Ribonuclease Inhibitor 88 279 IPR032675 -
Sebi21g00045 526 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 154 244 - -
Sebi21g00045 526 SUPERFAMILY L domain-like 2 250 - -
Sebi21g00045 526 Pfam C-JID domain 322 461 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi21g00045 Sebi-Chr21 1106505 1108311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi21g00045 1 212 WRKY Transcription Factor Family AT4G12020 35.377 4.80e-21 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi21g00045 - - mtr:25479456 841.262