Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi21g00044 ATGCTCTGTTACGCATGGAGCCTCTCTTTCGAACATGTAGGTGAAAAGTATCACATTTTGAAGATCTCTCTATACGGTGTGGTGAGTTTCACAATCATCTTTGTTATGTTCTTTGCAAGAAAAGGGTACTTAGGCCGGTTTTCAAAGAGTTTCCTTTTGAAAGCTCTAGTTGGAGTTTTGGCTCTAATGCTAACCTCTTTATACAACTTTTTCAGCGATAAAGACTCAAACCAAAAAACAGATATTTTCAACTTGATTTCTAATGGGTCATTTGCTTTAATGTTGTTGAGCTTGTCAAAGCAAATTGACCTTGGCTTTGAATTGGAACTACTTAATTTTTACCTTGGATGTCTCACAATACAATTGATGAAGATCAACTTGGGGTTCGTTTTTGTTGGAGCAGCTTATTGTTATTTCCTCAATGTCCTTCACTCCTATTCAGATTTCAATCAAGAGATTAGAACTTCTAGTAATGAAGAACACTTGGCAATTGAAATTGACACTGCTAAGGTAGAAGAAAGAGGAGGACTTGATAATGATCAAATAGGAAAATTCTATTCAATTCTTGGAATTGAGATAAAAGATGAGGAGATACTAATGTACCCTCAAGATCTAGAAGCCAAGCTTATAGAAGCAATGGCTTCAGGTTTTGAGAAGGAGCATTGCTACCCTGTTTTCTGCAGTTGGAGAAGGCTAGTTTTAGAGGAGAAGTTATTAATAAAGAACCTCATGATGAGTATTGAAGAGGTCCAAAAGTTGCCTTTGAAATATCTCAAAGATGAAATTGAATGTTGGATCAAAGCTACCAAGGATGGTTTTATGACACTGTTTCCAAATGAAAGGCATCTATGTAACCGTGTGTTTGGATTCTCATCTCCTTTTGCTGATAGCTCTTTCATGGAGATATGTCAAGAACCAACCATTCATCTATTGAACTTTGCTAATGCTGTGGCTTGTAGTACAAGCCGGTCATCACCAGAGCGTTTGTTTAAAATAGTGCTTGTGTTTGAGACACTGAATGGACTTTTACCTGAGTTGGAGTCAATATTCTCAGGTGATTGTTGTGTGGTTCTTTGGAATGAGGCAATGAGAATTTGTAAGAGGTTAAGAGATGCAATTAGAGGAGTTTTTATTGAGCTTGAAAATCTAATTCGCCAGGATCTAGGGAAGGTTGTTGTTTGTGGTGGTGGACTTCATCCAACTAATCATTATTTGATGAATTATCTCTTTGCAGTTTGTGAATGTTGGAAGACCATTGAGGTTGCTTTTGATGATGAAGGTTCACATTCTTCTTCTTTGTCTCTCCAGGTGGGTCAGATTTTAGAGTTGTTGGAGAGCAATTTGAAAGTCAACTCCAAGATTTACAAGGACTCTTCCTTGTGCTCTATTTTCATGATGAACAATTGGAGGTACATTGTGCACAAGGTGAAAAGGTGTGAATTAGAAAGGGTGTTAGGTGATGAGTGGATACAGAAACACACAGTGAAAATGGGGCAGTACCTTGTAAACTACCAGAGAAGGGCGTGGGATGAGGTTCTTGGAATGTTGAATGTAGATAATGATGAGTCACAAGTTGTGGCAGCTTCTTCAGAGTTATGGAGAGAAAAGGTTGAGATGATTAAGATGAAATTTGAGGAGATATGTGAGATGCAGGGTACATGGGTTGTGATTGATGAGCAGATGAGACAAGTCATGAAAAGTTCCTTGAAGAAAATCTTGTTGCTGGCGTTTGAAAAGTTCAGCGCAAGATTCCAAAATGCAGTAGATCCTGAACGTGATGATATGGACATGCATGTGGATTTTGGGGTCCTTGATGTTGTGGCTCTTATAGACAAGCTGTTCCAAGGAAAAGATGAGCACAGAAACCCCAGAGTTCAGCCAACGTGGACCATAGTCCTGCCCAGTACACAGGATTTTCATGAATGGAGGAAGTACGCTGAGAAGACAATTCTTCATTCTATGTACCCAAGGTAA 1974 0.388 MLCYAWSLSFEHVGEKYHILKISLYGVVSFTIIFVMFFARKGYLGRFSKSFLLKALVGVLALMLTSLYNFFSDKDSNQKTDIFNLISNGSFALMLLSLSKQIDLGFELELLNFYLGCLTIQLMKINLGFVFVGAAYCYFLNVLHSYSDFNQEIRTSSNEEHLAIEIDTAKVEERGGLDNDQIGKFYSILGIEIKDEEILMYPQDLEAKLIEAMASGFEKEHCYPVFCSWRRLVLEEKLLIKNLMMSIEEVQKLPLKYLKDEIECWIKATKDGFMTLFPNERHLCNRVFGFSSPFADSSFMEICQEPTIHLLNFANAVACSTSRSSPERLFKIVLVFETLNGLLPELESIFSGDCCVVLWNEAMRICKRLRDAIRGVFIELENLIRQDLGKVVVCGGGLHPTNHYLMNYLFAVCECWKTIEVAFDDEGSHSSSLSLQVGQILELLESNLKVNSKIYKDSSLCSIFMMNNWRYIVHKVKRCELERVLGDEWIQKHTVKMGQYLVNYQRRAWDEVLGMLNVDNDESQVVAASSELWREKVEMIKMKFEEICEMQGTWVVIDEQMRQVMKSSLKKILLLAFEKFSARFQNAVDPERDDMDMHVDFGVLDVVALIDKLFQGKDEHRNPRVQPTWTIVLPSTQDFHEWRKYAEKTILHSMYPR 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi21g00044 657 SUPERFAMILY Cullin repeat-like 209 614 IPR016159 -
Sebi21g00044 657 Pfam Exo70 exocyst complex subunit 264 589 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sebi21g00044 657 PANTHER EXOCYST COMPLEX PROTEIN EXO70 201 616 IPR004140 GO:0000145|GO:0006887
Sebi21g00044 657 Gene3D Exocyst complex component Exo70 156 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi21g00044 Sebi-Chr21 1066880 1069837 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi21g00044 204 621 EXO70 exocyst subunit family AT5G58430 48.349 8.88e-121 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi21g00044 K07195 - aprc:113848528 899.042