Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi21g00043 ATGTCTGAAAACGGAGAAGAGAAATTACTGGCTGTAGCCCGGCACATAGCGAAAACGCTGGGCCACAACAACAACATGGCTGATGATATTCTCCAAATATTCTCCAACTTTGATGGAAGGTTCTCGAAGGAGAACCTCTCTGAGAAGGTTGTAGATGCAGATCCCAGGGCCTGCGCCGCACTGGATCACTCCCTCAAAACCCTTGACCGCCGTATCTCTCACTACGTCTCTTCCGATCGTCCCATCTGGGCTGACTCCGCTGATGCTGCCGCCTTCCTCGACACCGTCGACGACGTTGTTGCTGCCGTCGCCGAATGGAACCATCTCGCCGGAGACAAGTCCGTCGGCGCGTTACTCATCCGCGCCGAGGAAATGCTCCAGCACGCCATGTTCCGCCTCGAGGACGAGTTCCGGTCACTCATGGAGCGCGGTGGCGAGTCATTCGACCTCACCCGGCCGTACCGGAGCGGCGAGTCAACGGAGAACTTACCGTTTGACTCGGAGGAAGAAGAGGACGAAGAAATCGACGACCAAGCAAGGAACGGAGAACATGAGGACCAGATTCCCGTGGCGATGCCGGTTACCGACTACGACATCGTTATCGACGCGCTGCCGTCGGGGACGATCAACGACCTTCACGAGATCGCGAAGCGTATGGTGGCCGGAGGGTTCGGGAAGGAGTGCTCTCACGTGTACAGTAGTTGCCGGAGAGAGTTCTTGGAGGAAAGCCTCTCGAGATTAGGGTTACAGAAACTCAGCATCGAGGACGTTCACAAGATGTCATGGCAGGATCTCGAAGACGAGATCGAAAGATGGATTAAGGCTTCCAATGTCGCTCTCAAGATACTTTTCCCAAGCGAGCGGCGACTCTGCGATCGCGTCTTCTTCGGATTCTCCTCCGCCGCTGATTTCTCCTTCATGGAGGTTTGCAGGGGATCCACCATTCAGTTGCTGAATTTCGCTGATGCCGTTGCAATCGGGAGCCGTTCGCCGGAGCGATTGTTTAGAATCCTCGACCTGTTTGAAACATTGCGTGACCTAATTCCTGAGTTTGAGTCTCTGTTTTGTGATCAGTACAGTGTGTCGCTCAGGAATGAAGCAATCACGATTTGGAAGAGATTGGGAGAAGCAATTAGGGGCATTTTCATGGAGTTGGAGAATCTGATTCGCCGCGATCCGGCTAAGTCGGCGGTTCCCGGTGGTGGGCTTCACCCCATTACCCGTTACGTGATGAACTACCTCCGTGCTGCTTGCCGTTCACGGCAGACTCTAGAGCAAGTGTTTGAAGACTATGGACATCCCTTGAAGGAATACCCTAAGCTTGATGATAGAGTAGCACACTCTTCCTCTCTCTCAGTGCAGATGGATTGGATTATGGAGCTATTGGAGAGCAATTTGGAAGCAAAGTCCAAAATCTACAAGGACCCTGCTTTGTGCTATGTTTTCTTGATGAATAATGGCAGGTACATAGTTCAAAAAAGCAAAGATAGTGAATTGGGAACCCTTTTGGGGGATGATTGGATCCGAAAACACACTGCAAAAGTTCGGCAATACCATGTACACTATCAAAGAAGCTCATGGAATAAGGTGCTGGGGATTCTGAAATTGGACAGCAATGGACCAGTGCCGCCTAATGCGGTGGCGAAGTCAATGAAAGAGAAGCTCAAGTCGTTTAACATGCTGTTTGAGGATATATGCAGGGTTCAGTCTTCATGGTTTGTCTTTGATGAGCAGCTCAGGGAAGAAATAAGAATTTCCCTTGAGAAAATCTTGTTGCCAGCTTATGGAAACTTCATTGGGAGGTTCCAGAGTGTTCCGGAACTTGGTAAGCATGCTGATAAGTATATTAAGTATGGAACGGAGGGGATTGAAGCAAGACTCAATGATTTATTTCAGGGAAGCAGTGGATCAACTGGTAGCCGAAAGTGA 1929 0.5049 MSENGEEKLLAVARHIAKTLGHNNNMADDILQIFSNFDGRFSKENLSEKVVDADPRACAALDHSLKTLDRRISHYVSSDRPIWADSADAAAFLDTVDDVVAAVAEWNHLAGDKSVGALLIRAEEMLQHAMFRLEDEFRSLMERGGESFDLTRPYRSGESTENLPFDSEEEEDEEIDDQARNGEHEDQIPVAMPVTDYDIVIDALPSGTINDLHEIAKRMVAGGFGKECSHVYSSCRREFLEESLSRLGLQKLSIEDVHKMSWQDLEDEIERWIKASNVALKILFPSERRLCDRVFFGFSSAADFSFMEVCRGSTIQLLNFADAVAIGSRSPERLFRILDLFETLRDLIPEFESLFCDQYSVSLRNEAITIWKRLGEAIRGIFMELENLIRRDPAKSAVPGGGLHPITRYVMNYLRAACRSRQTLEQVFEDYGHPLKEYPKLDDRVAHSSSLSVQMDWIMELLESNLEAKSKIYKDPALCYVFLMNNGRYIVQKSKDSELGTLLGDDWIRKHTAKVRQYHVHYQRSSWNKVLGILKLDSNGPVPPNAVAKSMKEKLKSFNMLFEDICRVQSSWFVFDEQLREEIRISLEKILLPAYGNFIGRFQSVPELGKHADKYIKYGTEGIEARLNDLFQGSSGSTGSRK 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi21g00043 642 FunFam Exocyst subunit Exo70 family protein 75 639 - -
Sebi21g00043 642 Gene3D Exocyst complex component Exo70 81 641 - -
Sebi21g00043 642 MobiDBLite consensus disorder prediction 148 182 - -
Sebi21g00043 642 Pfam Exo70 exocyst complex subunit 270 629 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sebi21g00043 642 MobiDBLite consensus disorder prediction 163 179 - -
Sebi21g00043 642 PANTHER EXOCYST COMPLEX PROTEIN EXO70 60 633 IPR004140 GO:0000145|GO:0006887
Sebi21g00043 642 SUPERFAMILY Cullin repeat-like 83 631 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi21g00043 Sebi-Chr21 1056564 1058492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi21g00043 1 635 EXO70 exocyst subunit family AT5G58430 69.969 0.0 904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi21g00043 K07195 - gmx:100803694 1090.1