Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi21g00037 ATGCCCATGCTCACCCAGATTTTCAGATGGCTGATGCAATCAGAGGTATGGAGATTTATAGGCTTTGGTTCAGCTGTTGTTGGGCTATTTTGTTACGCTCTCAGCTCTTCCTTCAACCATTTATTTGGAAACTGGAATTTGTTTAAGATATTCCTTTATAGCGTTTTCAGTTTCATCATTTGCCTCATGGTTTTGTTCGCAAAGATATGGCAACACTCTAGAAGTCTCCGGTTCAAAGCTAATTGGGCATTTATGGTTTTGACGATCACATCGGTCTATTCCTTTTTCTCCGATAAAGTGATGAATGGGAAACCAGATGCATATAGCCTAATTTTTTGTGCTGCCTTTGCTATTATGTCACTTAGCCTGTCGAGGCAAACTGAATGTGGATTCGAAGTGGATTTTCTCTATTTTTTTCTCGGATGTTTAATCGTACAGCTCATGAAGATTAGATTTGAGTTGGTTATTGTGGGTGCAGGTTTCAGTTATTCCCTCATTATTCTTCGTTCTTACTTTTCTTTGATAGATGTCGCACTGCAAAATGAGTATGTTGGACTCCAAGATGAACATTCTGTAGTCGTTGAAATCCATTCACCACAACTGCCAATTATTGCTAGTATGATGCAACAGCTCACATCTTGTGTGAAGGCGCTTCAACTGGAAAATTCGAATCTCATCGACATGTTTTTGGAGCAGGCGAAGGAATACTTTGAAGGTAACTCTGAACTAGCAGTAACCGACCATAACTTCATCATCGATGCGCTGCCGTCGGGAAGGATCAACGATCTTCACGAAACCGCCAAGTTGATGGTGGGCGCTGGGTTTGAGAAGGAGTTCTCCGAGGATAAGGAACCATTTTCCAATGAAATAATGATTGGAAGATGGATTACAGCTTCCAAGGTCACTCTCAAGATACTATTTCCTGGTGAGCGACGACTCTGCGATCATGTCTGTTTGGGATTCTCCTCTGCCGCAGATCGTTGTTTCACAGAGGTTTGCAAGGGAGCCACGATTCACCTGCTGAATTTTGCTGATACTGTTGCCGGTGGGAGCCCTTCAGTGAGCCGTTTGTTCCCAATGGTCGACGTGTTTCAGACACTGCATGATCTAATTCCCCAATTCCAATCATTGTTTCCCGATTCGTTGGTGAATGAAGCAATCGCAGTTTATAACAGATTGGGAGAAGCAAGCAGAGACGTTTTCATCGAATTAGACAATCTGGTTTTCCGTATCCCAGAGGCTAAGCTAATTGCCCCAGCCGATGGCGGTTATCATCCAATGATGGATAACATCATCAATCACCTCATCTCTGCTTGCAGGTCACGGCAGATCCTGGAGCAAATTTTACAAGATTACCCCAAGGATGCCAATGAAGTTGGAACATCTTCTATATTCACAGCGAAGATGAAGAACATAATGGAACTGTTAGAGAGAGAATTGGAAGCGAAGTCCAAAATCTACAGTGTTCCTGCTTTGCGCTATATTTTTATAATGAATAATCGGAAGCGCATAGAAATGATGGATGAAATACCCCAATTGAGAACCATTACTGGCAATGACTGGTTCGTAAAAACAGGGCAAAAGTCCAATACAATTTTGAACTCTATCAAAGAAGCTCATGTAACAAGTTGCTTAAGTTTTTGA 1644 0.4203 MPMLTQIFRWLMQSEVWRFIGFGSAVVGLFCYALSSSFNHLFGNWNLFKIFLYSVFSFIICLMVLFAKIWQHSRSLRFKANWAFMVLTITSVYSFFSDKVMNGKPDAYSLIFCAAFAIMSLSLSRQTECGFEVDFLYFFLGCLIVQLMKIRFELVIVGAGFSYSLIILRSYFSLIDVALQNEYVGLQDEHSVVVEIHSPQLPIIASMMQQLTSCVKALQLENSNLIDMFLEQAKEYFEGNSELAVTDHNFIIDALPSGRINDLHETAKLMVGAGFEKEFSEDKEPFSNEIMIGRWITASKVTLKILFPGERRLCDHVCLGFSSAADRCFTEVCKGATIHLLNFADTVAGGSPSVSRLFPMVDVFQTLHDLIPQFQSLFPDSLVNEAIAVYNRLGEASRDVFIELDNLVFRIPEAKLIAPADGGYHPMMDNIINHLISACRSRQILEQILQDYPKDANEVGTSSIFTAKMKNIMELLERELEAKSKIYSVPALRYIFIMNNRKRIEMMDEIPQLRTITGNDWFVKTGQKSNTILNSIKEAHVTSCLSF 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi21g00037 547 Pfam Exo70 exocyst complex subunit 294 538 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sebi21g00037 547 Gene3D Exocyst complex component Exo70 182 547 - -
Sebi21g00037 547 PANTHER EXOCYST COMPLEX PROTEIN EXO70 289 528 IPR004140 GO:0000145|GO:0006887
Sebi21g00037 547 SUPERFAMILY Cullin repeat-like 218 536 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi21g00037 Sebi-Chr21 845888 847621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi21g00037 245 504 EXO70 exocyst subunit family AT5G58430 49.660 8.55e-79 258