Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi21g00031 ATGGATGGTCACTCACTCTCAGGTGGCACCATTGAGAAAGACTCGCTCTCCACCTACCAGAATGTGGATAAACTAAACCCATCCCCTAGTGCCCTTGCATCTGATGTGGACAACTTTTCTATTGCTATTGGTAGTACCAATATCAATGAAAGAATTGATGATGGGTCCCAACATAGCCTATTTATGAATGGTTCAACATCCATAATCAAACCTGATGTGTTGGTCTCTGCTTCTGAATATGGATCTACTATTAACTCTAAACAAGCAATGTCTCCTTTTTCTATTGGTACTTGCATTGAGGATGATCTTGGTACCATGGGTGGACACTCACTTTATGATGATACCATTGGGAATGACTTGCTCTCCACCTTCTTCAATATGGATAAACTAAACCCATCCTTTGCTGCTCCTGCATCTACTGCAGACAACTTTGCTATTGCTAGTGGTACTACCAATATCAATGAAAGGCTGGACGTTGGGTCCCAACATAGCCAATTTATGAATGGTTCAACATCCATCATCAACCCTGACATATTGGTATCTACTTCTGAAATTGGCTCTACTATGAACTCAAGAAAAGCAATGTGTGCTTTTTCTATTGGTACTTGCATCAATGATGATCTTGGCACCATGGATAGTCACTCACTCTCCAGTGGCACCATTGATGAACACTTGCTCTCCACCCTCAATATGGATAAAATAAACCCATCCTCTGGTGCCCTTGCACCTGCTGCAGATAACTTTTCTATTGTTATTGGTACTACCAATATCAATGAAAGAATTGATGATGGGTCCCAACATAGCCTATTTATGAATGGTTCAACATCCATAATCAAACCTGATGTGTTGGTCTCTACTTCTGAATATGGATCTGCTATTAACTCTAAACAAGCAATGTCTCCTTTTTCTATTGGTACTTGCATTGATGATGATCTTGGTACCACGGGTGGTCACTCACTTTATGATGATACCATTGGGAATGACTTGCTCTCCACCTTCTTCAATATGGATAAACTAAACCCATCCTTTGCTGCTCCTGCATCTACTGCAGACAACTTTGTTGTTGCTAGTGGTCCTACCAATATCAATGAAAGGCTGGACGCTGGGTCCCAACATAGCCAATTTATGAATGGTTCAACATCCATCATCAACCCTAACATATTGGTATCTACTTCTGAAATTGGCTCTACTATGAACTCAAGAAAAGCAATGTGTGCTTTTTCTATTGGTACTTGCATCAATGATGATCTTGGCACCATGGATAGTCACTCACTCTCCAGTGGCACCATTGATGAACACTTGCTCTCCACCCTCAATATGGATAAAATAAACCCATCCTCTGGTGCCCTTGCACCTGCTGCAGATAACTTTTCTATTGTTATTGGTACTACCAATATCAATGAAAGAATTGATGATGGGTCCCAACATAGCCTATTTATGAATGGTTCAACATCCATAATCAAACCTGATGTGTTGGTCTCTACTTCTGAATATGGATCTGCTATTAACTCTAAACAAGCAATGTCTCCTTTTTCTATTGGTACTTGCATTGATGATGATCTTGGTACCACGGGTGGTCACTCACTTTATGATGATACCATTGGGAATGACTTGCTCTCCACCTTCTTCAATATGGATAAACTAAACCCATCCTTTGCTGCTCCTGCATCTACTGCAGACAACTTTGTTGTTGCTAGTGGTCCTACCAATATCAATGAAAGGCTGGACGCTGGGTCCCAACATAGCCAATTTATGAATGGTTCAACATCCATCATCAACCCTAACATATTGGTATCTACTTCTGAAATTGGCTCTACTATGAACTCAAGAAAAGCAATGTCTGCTTTTTCTATTGGTACTTGCATCAATGATGATCTTGGCACCATGGATAGTCACTCACTCTCCAGTGGCACCATTGATGAACACTTGCTCTCCACCCTCAATATGGATAAAATAAACCCATCCTCTGGTGCCCTTGCATCTGCTGCAGATAACTTTTCTATTGCTATTGCTACTACCAATCTCAATGAAAGGCTTGACGTTGGGTATCGAGATAGCCAGTTTATGAATGCTTCAACATCCATAATCAAACCGGACATATTGGTCTCTGCTTTTGAAAATGGCTCTATTATTAACTCAAACAAACAATGTCTACTTTTTCTATTGACAACTTTGCTATTGCTAGTGGTACTACCAATATCAATGAAAGGCTTGACATTGGGGTCCCAACATAGCCAATTTATGAATGGTTCAACATCCATGACCAAACCTGACATGTTGGTCTCTGCTTCTGAAAATGGATCTACTATTAACTCAAGAAAAGCAAAGTCTGCTACTGAACTTGCGGAGCTTGCCTTAGTTGACCCCAAGCGTGCTAAAAGGATTTTGGCAAATAGACAGTCTGCTATAAGATCAAAGGAAAAGAAGGCGCGTTACATTTCGGAGCTTGAAAAGAAGGTGCAAACATTGGAAACTGAAAAGACATCCTTATCTACACAGTTAACTATCTCGCAAAGGGATACTCAAAGAAAGGATGATGAGAATAATGAGTTAAGGATGGGGTTGCAAACTCTGATACAACAACTTCAATTGGATGACAGTGAGTTCATGCTGCTATAA 2619 0.4044 MDGHSLSGGTIEKDSLSTYQNVDKLNPSPSALASDVDNFSIAIGSTNINERIDDGSQHSLFMNGSTSIIKPDVLVSASEYGSTINSKQAMSPFSIGTCIEDDLGTMGGHSLYDDTIGNDLLSTFFNMDKLNPSFAAPASTADNFAIASGTTNINERLDVGSQHSQFMNGSTSIINPDILVSTSEIGSTMNSRKAMCAFSIGTCINDDLGTMDSHSLSSGTIDEHLLSTLNMDKINPSSGALAPAADNFSIVIGTTNINERIDDGSQHSLFMNGSTSIIKPDVLVSTSEYGSAINSKQAMSPFSIGTCIDDDLGTTGGHSLYDDTIGNDLLSTFFNMDKLNPSFAAPASTADNFVVASGPTNINERLDAGSQHSQFMNGSTSIINPNILVSTSEIGSTMNSRKAMCAFSIGTCINDDLGTMDSHSLSSGTIDEHLLSTLNMDKINPSSGALAPAADNFSIVIGTTNINERIDDGSQHSLFMNGSTSIIKPDVLVSTSEYGSAINSKQAMSPFSIGTCIDDDLGTTGGHSLYDDTIGNDLLSTFFNMDKLNPSFAAPASTADNFVVASGPTNINERLDAGSQHSQFMNGSTSIINPNILVSTSEIGSTMNSRKAMSAFSIGTCINDDLGTMDSHSLSSGTIDEHLLSTLNMDKINPSSGALASAADNFSIAIATTNLNERLDVGYRDSQFMNASTSIIKPDILVSAFENGSIINSNKQCLLFLLTTLLLLVVLPISMKGLTLGSQHSQFMNGSTSMTKPDMLVSASENGSTINSRKAKSATELAELALVDPKRAKRILANRQSAIRSKEKKARYISELEKKVQTLETEKTSLSTQLTISQRDTQRKDDENNELRMGLQTLIQQLQLDDSEFMLL 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi21g00031 872 MobiDBLite consensus disorder prediction 827 848 - -
Sebi21g00031 872 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 619 866 - -
Sebi21g00031 872 Coils Coil 806 833 - -
Sebi21g00031 872 CDD bZIP_plant_RF2 791 842 IPR044759 GO:0003700|GO:0006355
Sebi21g00031 872 SMART brlzneu 786 850 IPR004827 GO:0003700|GO:0006355
Sebi21g00031 872 SUPERFAMILY Leucine zipper domain 790 839 IPR046347 GO:0003700|GO:0006355
Sebi21g00031 872 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 788 851 IPR004827 GO:0003700|GO:0006355
Sebi21g00031 872 Gene3D - 789 846 - -
Sebi21g00031 872 Pfam bZIP transcription factor 790 841 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi21g00031 Sebi-Chr21 651539 654692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi21g00031 743 867 bZIP Transcription Factor Family AT1G06070 63.200 3.18e-41 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi21g00031 bZIP_1 6e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi21g00031 - - qsu:112034768 153.68