Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi21g00025 ATGGTGCCCATGCTCATTCAAATTCTGAGATGGCTGATGCAGCCTTTCATATGGAGATTTGTGGGCTTTGGTTCAGCTGTTGTTGGACTACTTTGTTACGCTCTCAGCTCTTCCTTCAACCATCTATTTGGACAGTGGAATTTGTTTAAAATATTTCTTTACACTGCTTTTAGTTTCATCATCAGTCTCTTGATTTTGTATGCAGAGAAATGGAAACACTCGAGAAGTCTCCGATTCAAAGCTCATTCAGCATTTTTGGTTTTGACCATCACCTCCGTCTTTTCCTTTTTCTCGGATAAAGTGATGAATGGAAAACCAGATGCATATAGCCTGATTTCATGTGCTGCCTTTGCTATCATGACACTAAGCTTGTCGAGGCAAACACAGTGCGGATTCGAAGTGGATCTTCTCTATTTCTTTCTCGGATGTCTAACAGTGCAACTCATGAAGATTAAATTGGAGTTGGCTATTGTTGGAGCAGGTTTCAGTTATTCCCTTGTTATTCTTCGTTCTTCCTTTTCTTCCATAGATGCCGCACCACAAAACGAATATGCTGGAGTCCAAGATCAACATTCGGTAGTCATTGAAGTCGATTCACCACAAGTGGCCACTAGTAGTATTGATATTACTAGTATGATGCAACAACTCACGATTTGTGTGGAGGCACTTCATCAGGAAGATTCGAAACTCATCGACATGCTTTTGAACGAGGTGAAGGAATACCTTGAAGGCACTGAATCTGAATTATTGGTGACTGACCATAACTTCGTGATTGATGCGTTGCCATCAGGAAGGATCAACGACCTTCAACAAACGGTGAAGATATTGGTAGGCGCTGGATTTGAGAAGGAGTGTTCTGATATGTTCAGCAATTGGCGGAGGGAATGGTTGGAGGAGTGCCTAACAGATAACTTAGTAGGCTCGCAAGAAATCAACATCCAGAACGAGAAGGAGCAAGAAAGAAAAGCATTTCTAAATAAAATGATTACAAGATGGAACAAAGCTTCAATAATCGCTCTCAAGATACTATTCCCCAGTGAGCGGCGGCTCTGTGATCGTGTCTTTTCGGGGTTTTCCTCTGCTGCTGAGCGTTGTTTCACAGAGGTTTGCAGGGGATCTGCGTTTCAGCTGCTTAATTTTGCCGATGTGATTGCTGATGAGAGCCCCTCAGTGTGGCATTTTTTCAACGTCCTCCACGTGTTTGAAGGATTGCGTGATTTAATTACGGAATTCCAATCAATGTTTCCTAATTCGTTGGTGAATGAAGCAATCAAAGTCCAGAACAGGTTAGGAGAAGCAAGCAGGGAACTTTTCTTGGATTTCGATAATCTTATTTTCCGTGTCCCTGAGGAGAAGGAAGTTGCTCCGGCAGATGGCTGGCGTCATCCAATGATATCCATTGTCATGAACTCCCTCTTTTCTGCTTGCAGGTCACGGCAGACCCTCGAGCAAATTTTACAAGAATACCCCAAGGTGTCTAATGGAGCGGGAACATATTCTTTCACAGGGCAAATGGAGCGGATCATGGAGCTGTTAGAGAGAAAATTGATAGCTAAGTCCAAAATATACAAGGACCCTGCTTTGCGCTATTTTTTCATGATGAATAATCGCAGGTGCATAGAAACTGTGAATGAAAGGTGGGGATTGGGAACCATTTTTGGTGATGATTGGTTCCGGAATAACAGAGGAAAAATCCAACAAAACCTTGAACTCTATCAAAGAAGCTCGTGGGATAAGGTGGTAGACATTTTGAAAGTGGATAGCGATGAGTCTTTGTCGCCGAATGTTGCAGTAGATTCAATGAAAGACAAGCTCAATTTGTTTAATCTACAGTTTGAGCAGATATGCAGCGTTCAATCTACATGGTGTGTCTCTAATAAGAAGCTAAGGGCACAAATAATAACATCCTTGGAAAACATCTTGTTGCCAGCCTATGAAAACTTCGTCGGGAGGTTACAAAATGTTCTTGGTAAGCATGCTTATGAGTTTATTGAGTATGGGATGTTTGACATTCAAGATCGACTCAACCATTTGTTCCAGGGTGAAATCATAATACAAAATTTATTACAAACATTATTCTAA 2082 0.4164 MVPMLIQILRWLMQPFIWRFVGFGSAVVGLLCYALSSSFNHLFGQWNLFKIFLYTAFSFIISLLILYAEKWKHSRSLRFKAHSAFLVLTITSVFSFFSDKVMNGKPDAYSLISCAAFAIMTLSLSRQTQCGFEVDLLYFFLGCLTVQLMKIKLELAIVGAGFSYSLVILRSSFSSIDAAPQNEYAGVQDQHSVVIEVDSPQVATSSIDITSMMQQLTICVEALHQEDSKLIDMLLNEVKEYLEGTESELLVTDHNFVIDALPSGRINDLQQTVKILVGAGFEKECSDMFSNWRREWLEECLTDNLVGSQEINIQNEKEQERKAFLNKMITRWNKASIIALKILFPSERRLCDRVFSGFSSAAERCFTEVCRGSAFQLLNFADVIADESPSVWHFFNVLHVFEGLRDLITEFQSMFPNSLVNEAIKVQNRLGEASRELFLDFDNLIFRVPEEKEVAPADGWRHPMISIVMNSLFSACRSRQTLEQILQEYPKVSNGAGTYSFTGQMERIMELLERKLIAKSKIYKDPALRYFFMMNNRRCIETVNERWGLGTIFGDDWFRNNRGKIQQNLELYQRSSWDKVVDILKVDSDESLSPNVAVDSMKDKLNLFNLQFEQICSVQSTWCVSNKKLRAQIITSLENILLPAYENFVGRLQNVLGKHAYEFIEYGMFDIQDRLNHLFQGEIIIQNLLQTLF 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi21g00025 693 Pfam Exo70 exocyst complex subunit 330 676 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sebi21g00025 693 SUPERFAMILY Cullin repeat-like 233 679 IPR016159 -
Sebi21g00025 693 Gene3D Exocyst complex component Exo70 191 684 - -
Sebi21g00025 693 PANTHER EXOCYST COMPLEX PROTEIN EXO70 108 681 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi21g00025 Sebi-Chr21 581882 583963 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi21g00025 251 681 EXO70 exocyst subunit family AT5G58430 48.970 3.49e-120 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi21g00025 - - gmx:100788866 705.286