Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi21g00024 ATGTCTCCTTTTTCTATTGGTACTTGCATCGAGGATGATCTTGGTACCACGGGTTGTCACTCACTTTATGATGATACCATTGGGAATGACTTGCTCTCCACCTTCTTCAATATGGATAAACTAAACCCATCCTCTGGTGCTCTTGCATCTACTACAGACAACTTTGCTGTTGCTAGTGGTACTACCAATATCAATGAAAGGCTTGACGTTGGGTCCCAACATAGCCAATTTATGAATGGTTCAACATCCATCATCAACCCTAACATATTGGTATCTGCTTCTGAAATTGACTCAACTATGAACTCAAGAAAAACAATTCCTCCTATTTCTATTGGTACTTGCATCGAGGATGATCTTGGTACCACGGGTGGTCACTCACTTTATGATGATACCACTGGGAATGAATTGCTCTGCATCTTCTTCAATAAGGATAAACTAAACCCATCCTCTGGTGCTCCTGCATCTATTGCAGATAACTTTGTTGTTGCTAGTGGTACTACCAATATCAATGAAAGGCTTGATGTTGGGTCCCAACATAGCCAAATTATGAGTGGTTCAACATCCATCGTCAACCCTGACATATTGGTATCTGCTTCTGAAATTGGCTCTACTATGAACTCAAGAAAAGCAATGTCTCCTTTTTCTATTGGTACTTGCATCGAGGATATTCTTGGTACCACGGATGGTCACTCACTTTATGATGATACCACTGGGAATGACTTGCTCTCCACCTTCTTCAATATGGATAAACTAAATCCATCCTCTGGTGCTCCTGCATCTACTACAGACAACTTTGCTGTTTCTAGTGGTACTACCAATATCAATGAAAGGCTTGATGTTGGGTCCCAACATAGCCAATTTATGAATGGTTCAACATCCATCATCAATCCTGACATATTGCTATCTGCTTCCGAAATTGGCTCTACTATGAACTCAAGAAAAGCAATGTCTGCTTTTTCTATTGGTACTTGCATCAACGATGATCTTGGCACCATGGATAGTCACCCACTCTCTAGTGGCACCATTGATGAAAACTTGCTCTCCGCCAACCTCAATATGGATAAAATAAACCCATCCTCTGGTGTCGTTACATCTGCTGCAGATAACTTTTCTATTGCTATTAGTACTACCAATATCAATGAAACGCTTGACGTTGGGTCTCGAGATAGCCAGTTTATGAATGGTTCAACATCCATAATCAAACCAGACATGTTGGTCTCTGCTTTTGAAAATGGATCTACTATTAACTCAAAACAAACAATAAAACTTGCTATTGCTAGTGGTACTACCAATATCAATGAAAGGCTTGACGTTGGGTCCCAACATAGCCAATTTATGAATGGTTCAACATCCATCATCAAACCTGACATGTTAGTCTCTGCTTCTGAAAATGGATCTACTATTAACTCAAGAAAAGCAAAGTCTGCTACTGAGCTTGCGGAGATTGCCTTGGTTGACCCCAAGCGTGCAAAAAGGATTTTGGCAAATAGACAGTCTGCTATAAAATCAAAGGAAAAGAAGGCGCATTACATTTCAGAGCTTGAGAAGAAGGTGCAAACATTGGAAACTGAAAAGACATCCTTATCTACACAAAGGGAGAATCAAAGAAAGGATGATGAGAATAATGAGTTAAGGTTGGGGTTGCAAACTCTGATACAACAACTTCATTTGGATGATGGTGAGTTCATGCTGCTATAA 1698 0.4011 MSPFSIGTCIEDDLGTTGCHSLYDDTIGNDLLSTFFNMDKLNPSSGALASTTDNFAVASGTTNINERLDVGSQHSQFMNGSTSIINPNILVSASEIDSTMNSRKTIPPISIGTCIEDDLGTTGGHSLYDDTTGNELLCIFFNKDKLNPSSGAPASIADNFVVASGTTNINERLDVGSQHSQIMSGSTSIVNPDILVSASEIGSTMNSRKAMSPFSIGTCIEDILGTTDGHSLYDDTTGNDLLSTFFNMDKLNPSSGAPASTTDNFAVSSGTTNINERLDVGSQHSQFMNGSTSIINPDILLSASEIGSTMNSRKAMSAFSIGTCINDDLGTMDSHPLSSGTIDENLLSANLNMDKINPSSGVVTSAADNFSIAISTTNINETLDVGSRDSQFMNGSTSIIKPDMLVSAFENGSTINSKQTIKLAIASGTTNINERLDVGSQHSQFMNGSTSIIKPDMLVSASENGSTINSRKAKSATELAEIALVDPKRAKRILANRQSAIKSKEKKAHYISELEKKVQTLETEKTSLSTQRENQRKDDENNELRLGLQTLIQQLHLDDGEFMLL 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi21g00024 565 Pfam bZIP transcription factor 488 538 IPR004827 GO:0003700|GO:0006355
Sebi21g00024 565 Coils Coil 504 538 - -
Sebi21g00024 565 Gene3D - 487 553 - -
Sebi21g00024 565 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 486 538 IPR004827 GO:0003700|GO:0006355
Sebi21g00024 565 CDD bZIP_plant_RF2 489 538 IPR044759 GO:0003700|GO:0006355
Sebi21g00024 565 MobiDBLite consensus disorder prediction 521 541 - -
Sebi21g00024 565 SUPERFAMILY Leucine zipper domain 488 537 IPR046347 GO:0003700|GO:0006355
Sebi21g00024 565 SMART brlzneu 484 557 IPR004827 GO:0003700|GO:0006355
Sebi21g00024 565 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 239 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi21g00024 Sebi-Chr21 522126 524424 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi21g00024 434 560 bZIP Transcription Factor Family AT1G06070 57.576 1.35e-38 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi21g00024 bZIP_1 3.6e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi21g00024 - - csv:101210291 156.762