Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi21g00020 ATGGCAACACTCGAGAAGCCTCCGATTCAAAGCTCATTCAGCATTTTGGTTTTGACCATCACCTCCGTCTTTTCCTTTTTCTCCGATAAAGTAATGAATGGAAAACCAGATGCATATAGCCTTATTTCATGTGCTGCCTTTGCTATCATGTCACTCAGCTTGTCAAGGCAAACACAGTGCGGATTCGAAGTGGATCTTCTCTATTTTTTTCTTGAATGTTTAACAGTGCAACTCATGAAGATTAAATTGGAGTTAGTTATTGTTGGAGCAGGTTTCAGCTATTCCCTTATTATTCTTCGTTCTTCCTTTTCTTCCATAAATCCAACCGTGAAAACGAGCAATCTTGGACTCCAAGATCAACACATAGTCATTCAGGTCGATTCACAACAACTCGCCAACACTGATACTGAGGTTTGCCATGGAGCAGCGATTCAGTTATTGAATTATGCTGATGCGTTTGTGACTCGGAGTCCTTCAGCTTGGCTTTTGTTTCAAACCCTTGACATGTTTGACACATTGCGTGAAATGATTCCCGACTTCGAATCGTTGTTTCCTGATTCGTTGGTCAAGGAAGCAATTAGAATCCAGAATAGATTGGGAGAAGCAACTAGGGACATTTTCATGGAATTGGGAATCTGA 639 0.41 MATLEKPPIQSSFSILVLTITSVFSFFSDKVMNGKPDAYSLISCAAFAIMSLSLSRQTQCGFEVDLLYFFLECLTVQLMKIKLELVIVGAGFSYSLIILRSSFSSINPTVKTSNLGLQDQHIVIQVDSQQLANTDTEVCHGAAIQLLNYADAFVTRSPSAWLLFQTLDMFDTLREMIPDFESLFPDSLVKEAIRIQNRLGEATRDIFMELGI 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi21g00020 212 PANTHER EXOCYST COMPLEX PROTEIN EXO70 136 210 IPR004140 GO:0000145|GO:0006887
Sebi21g00020 212 SUPERFAMILY Cullin repeat-like 137 210 IPR016159 -
Sebi21g00020 212 Pfam Exo70 exocyst complex subunit 136 210 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sebi21g00020 212 Gene3D Exocyst complex component Exo70 123 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi21g00020 Sebi-Chr21 415855 416931 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi21g00020 137 210 EXO70 exocyst subunit family AT5G58430 53.846 5.56e-19 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi21g00020 - - mtr:11437088 187.193