Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi219g00035 ATGGGACTGAGGAGGAAAGGTGGTAAGGGAACACCTGTGAACATCATCGTTGGATCACAGGTTTGGGTTGAGGATCCTGAGATTGCATGGATTGATGGTGAGGTGACACAAATCAATGGCACAAATGCCACCATCATTACCACAGATGGGAAAACTGTGGTGGCAGAAATTTCAAGTATATACCCTAAAGATACAGAGGCACCACCTGCAGGGGTTGATGACATGACCAAGCTAGCATACCTCCACGAGCCAGGAGTCCTGCATAACCTTGCCTGTCGTTTTTCTCTCAATGAGATATATACATATACAGGAAATATCTTAATAGCAGTGAATCCTTTTCGAAGACTACCACACTTGTATGACATCCATATGATGGAGCAGTACAAAGGAGCAGCATTTGGAGAGCTGAGTCCTCACCTTTTTGCTGTAGCAGACACCTGTTACAGGGCAATGATAAATGAAAATGGAAGTCAATCCATTTTGGTAAGTGGAGAGAGTGGAGCTGGTAAAACTGAGACAACAAAAATGCTAATGAGATATCTAGCCTTCATGGGGGGTAGATCAGGTACAGAAGGAAGAACTGTAGAACAACAGGTTTTGGAGTCCAATCCAGTGTTGGAAGCATTTGGAAATGCCAAAACTGTTAAAAACAACAATTCAAGTCGTTTTGGTAAATTTGTTGAAATTCAATTTGACAAGAATGGGAAGATTTCTGGAGCTGCAATCCGTACATATCTCCTTGAAAGGTCACGAGTTTGCCAGATCTCTGAGCCGGAGAGAAACTATCATTGCTTTTACATGCTTTGTTCAGCACCACCAGAGGATGTCAAAAAGTACAAGTTAGGGGACCCAAGGCAATTCCACTACCTTAATCAATCAAGCTGTTACGAAGTGTCAAATGTAGATGATGCAAAAGAATACTTGGAAACCAGAAATGCAATGGATATTGTAGGTATCAGCCAGGATGAGCAGGATGCCATCTTTCGTGTGGTGGCTGCAATCCTTCATCTTGGAAACATTAATTTTGTCAAAGGGAGTGAAGTTGATTCTTCCAAACTGAAAGATGACAAATCACTCTTCCACCTTCGAACAGTTGCAGAGTTATTCATGTGCGATGAGAAATCACTAGAAGACTCACTTTGCAAGCGTGTCATTGTTACTCCTGATGGTAACATTACAAAACCACTAGACCCAGATGCAGCTGCTTTGAGTCGAGATGCTTTGGCAAAGACTGTGTACTCCAGATTGTTTGATTGGATTGTGGACAAGATTAACAATTCAATTGGTCAAGATTCCAATGCAGTAAGCATAATAGGAGTCCTTGACATTTATGGATTTGAAAGTTTCAAAATCAACAGTTTTGAGCAATTATGCATCAACCTAACAAATGAGAAGTTGCAACAACATTTTAATCAGCATGTATTCAAGATGGAGCAAGAAGAGTACACAAAGGAAGAAATCAATTGGAGCTATGTAGAATTTGTGGATAATCAAGATGTTCTTGACCTTATTGAGAAGAAACCTGGGGGGATTATTGCTCTTCTAGATGAAGCCTGCATGTTCCCCAAGTCAACTCATGAGACTTTTGCACAAAAGATGTACCAGACATACAAAGGACACAAGCGCTTCAGCAAGCCTAAACTTTCTCGAACAAATTTCACAATTAACCACTATGCTGGAGATGTCACATACCAAGCAGATCATTTTCTTGATAAAAATAAAGATTATGTTGTAGCAGAGCATCAAGCTCTTTTATGTGCTTCCAAGTGCCCGTTTGTTGCTAATCTTTTCCCTCCTTTACCTGAGGAGACATCAAAGCAATCAAAATTCTCTTCCATTGGTTCACAGTTTAAGCAACAACTGCAATCACTCATGGAGACACTTAACACAACAGAACCACATTACATAAGATGTGTTAAGCCAAATACAGTTTTGCAGCCAGGAATCTTTGAGAACTTCAATGTCTTAAACCAGTTAAGATGTGGGGGAGTACTTGAGGCAATAAGAATTAGTTGTGCTGGATATCCAACAAAAAGAACATTTGAAGAGTTCCTTGATCGCTTTGGAATGCTAGCCCCCGACGTCCTTGATGGATCTGATGAGAAAAAGGCATCTATTGCCATCTGTGATAAGATGGGATTAAAAGGCTATCAAATGGGGAAAACAAAGGTATTTCTCAGAGCTGGTCAGATGGCTGAATTAGATGCACGAAGAGCCGAAGTCTTAGCTAAAGCAGCTAGACACATACAGAGACAAATCCGGACACATTTAACCAGGAAAGAGTTCATTACCCTGAGAAATGCCACAATTCATATCCAGAAGATTTGGAGAGCAAAACTAGCACGTAAACTCTATGAGTATATGAGGAGGGAAGCAGCTTCTATCCGGATACAGAAACATGTGCGTGCACACAGAGAAAGAATGTATTATACATCATTACAAGCATCATCTATTGTTATTCAATCAGGGATGAGAGCATTAGCAGCGCGAAATGAATATAGATACAGAAGAAGAACAAAGGCTTCAACCAAAATTCAGACACAATGGAGAAGAGTCCAAGCTCTTTCTGATTACAAACAGCAGAAGAAGGCAACTATTATACTTCAGTGTCTCTGGAGAGCTAGAGTGGCACGAAAAGAGCTCAGAAAGCTTCGGATGGCTGCAAGGGAAACTGGGGCACTTAAGGAAGCCAAGGACAAGTTGGAGAAGCGTGTTGAGGAGCTTACGTGGAGACTGGATATTGAAAAGCACTTGCGGATTGACCTTGAAGAAGCAAAAGGGCAAGAGATAGCAAAATTACAAAATGCTTTACAAGAAATGCAAGCTCAGCTTGATGAAGCCCATGCTGCAATTATACATGAGAAAGAAGCAGCAAAATTGGCAATTGAACAAGCACCACCAGTAATCAAAGAGGTACCTGTTGTAGACAACACCAAGCTAGAGTTACTGACAAATAAAAATGAGGAGCTGGAGAGTGAAGTAGAAGAGCTGAAAAAGAGAATTAAAGATTTTGAAGAAAGGTGCTCGGAAATTGAAAAAGAGAATCAGGCAAGGCTGAAAGAGGCAGAAGAAGCACAACTTAAAGCAGCACAACTTCAGGAAACTATTGAAAGATTAGAATTGAGTTTGTCAAACCTTGAGTCCGAGAACCAGGTTCTATGTCAGCAGTCTTTGGTAGAATCAAAAAATGAAGAACTCTCTGAAGAGATTAAAGCACTCAAGGGTCAGATAGAAAACCTAGAATCAGAAAATGAATTCCTACGGAGCCAGGCAGCAGCACCAGCTTTAGAGCAGAAAGTTCATCCAGAAAAAATAGAAACGGATCAGGAAGTTGCTATTGTAGAACAGATTCAACCGAGAGTTATTGCAGTTAATATGAATGCACAAATCAAGAGCATGGATAATGGAAATCAAACAGAAGAAGAATGGCATGCAAGAAAAGAACCAAGAGCACCTGTCTCCTATCTTACAAAACAAAGATCACTGACAGACAGGCAGCAGGAAAATCATGATGCACTGCTTAAGTGTCTCACGGAAGATAAGCGATTTGAGAAAAACAGACCAGCAGTTTCTTGTATTGTTTATAAAGCACTTCTTCATTGGAGATCCTTTGAGGCAGAGAAGACACATATATTTGATAAAATTATTCACGCCATCCGATCATCTATAGAGAGTCAAGAAGGAATCAATGATCTAGCATTTTGGCTTTCAACAACTTCAACACTTCTGTTTTATCTACACTGCACACTCAAGGCCAGCAATACAACAAAGGCAGTGTCACGTAATCGAAACTCTCCTGCCACTCTATTTGGAAAAATGGCACAAGGTTTACGATCATCTTCGATGGGCATGGGGATTTCAAGTGGCTACAGTGGAATGGTGGACAAGCCAAATGAGCAATCTAAAGTGGAAGCCAAGTACCCAGCTATTCTGTTTAAGCAACATTTAACTGCTTATGTGGAGAAGATATATGGAATGATCCGTGATAGTTTAAAGAAAGAGATTAGCCCATTTTTAAATTTGTGTATTCAGGCACCAAGATCCATAAGGACCAGATCAATAAGAGGGTCATCCAGAAACATCCATTCAAATATAGTTGCAAAACAACATGCATTGCATATGCACTGGAAAAGCATTGTCAACAAGTTAGACCATGCCTTGGGTATATTGTCTGATAACTATGTCCCTCCCATGATAACAAGGAAGATATTTAGTCAGGTTTTCTCATTCATGAATGTTCAACTCTTTAATAGTTTGTTGCTTCGTCGTGAGTGCTGCTCTTTTAGCAATGGAGAATATTTGAAGGCAGGCTTGCATGAGTTGGAACTATGGTGTCTCAAAGCAACAGATCAGTTTGCTGGGTCATCTTGGGATGAACTCAAACACATACGCCAAGCTGTGGGCTTTCTGGTTTCAAAATGCTTCATGTATGCAGGTTTTGCATCAGAAGACTCAAAATCTTTGGAGGAGATCACAAATGAACTCTGCCCGGTGTTAAGTATTCCACAAATATATCGTATTGGAACTATGTTCTGGGATGACAAGTATGGAGCACAAGGATTATCTCCAGAGGTCATTAGCAGAATGAGAGTGCTTATGACAGAAGAGTCAATAAACATACCCAACAACTCATTCCTTCTTGAGGTGGATTCCAGCATACCGTTCTTAATGGAGGAGATGTTCCGGTCAATGAGTGACATCCGCCTATCAGATATGAATGTGGATCCACCACCAATCCTCAGGCAAAAGTCTGATTTCCAATTCTTGTTGCAACAAATGGATAGTGACTCTCAGTGA 4797 0.4055 MGLRRKGGKGTPVNIIVGSQVWVEDPEIAWIDGEVTQINGTNATIITTDGKTVVAEISSIYPKDTEAPPAGVDDMTKLAYLHEPGVLHNLACRFSLNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQYKGAAFGELSPHLFAVADTCYRAMINENGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSGTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNGKISGAAIRTYLLERSRVCQISEPERNYHCFYMLCSAPPEDVKKYKLGDPRQFHYLNQSSCYEVSNVDDAKEYLETRNAMDIVGISQDEQDAIFRVVAAILHLGNINFVKGSEVDSSKLKDDKSLFHLRTVAELFMCDEKSLEDSLCKRVIVTPDGNITKPLDPDAAALSRDALAKTVYSRLFDWIVDKINNSIGQDSNAVSIIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKGHKRFSKPKLSRTNFTINHYAGDVTYQADHFLDKNKDYVVAEHQALLCASKCPFVANLFPPLPEETSKQSKFSSIGSQFKQQLQSLMETLNTTEPHYIRCVKPNTVLQPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFEEFLDRFGMLAPDVLDGSDEKKASIAICDKMGLKGYQMGKTKVFLRAGQMAELDARRAEVLAKAARHIQRQIRTHLTRKEFITLRNATIHIQKIWRAKLARKLYEYMRREAASIRIQKHVRAHRERMYYTSLQASSIVIQSGMRALAARNEYRYRRRTKASTKIQTQWRRVQALSDYKQQKKATIILQCLWRARVARKELRKLRMAARETGALKEAKDKLEKRVEELTWRLDIEKHLRIDLEEAKGQEIAKLQNALQEMQAQLDEAHAAIIHEKEAAKLAIEQAPPVIKEVPVVDNTKLELLTNKNEELESEVEELKKRIKDFEERCSEIEKENQARLKEAEEAQLKAAQLQETIERLELSLSNLESENQVLCQQSLVESKNEELSEEIKALKGQIENLESENEFLRSQAAAPALEQKVHPEKIETDQEVAIVEQIQPRVIAVNMNAQIKSMDNGNQTEEEWHARKEPRAPVSYLTKQRSLTDRQQENHDALLKCLTEDKRFEKNRPAVSCIVYKALLHWRSFEAEKTHIFDKIIHAIRSSIESQEGINDLAFWLSTTSTLLFYLHCTLKASNTTKAVSRNRNSPATLFGKMAQGLRSSSMGMGISSGYSGMVDKPNEQSKVEAKYPAILFKQHLTAYVEKIYGMIRDSLKKEISPFLNLCIQAPRSIRTRSIRGSSRNIHSNIVAKQHALHMHWKSIVNKLDHALGILSDNYVPPMITRKIFSQVFSFMNVQLFNSLLLRRECCSFSNGEYLKAGLHELELWCLKATDQFAGSSWDELKHIRQAVGFLVSKCFMYAGFASEDSKSLEEITNELCPVLSIPQIYRIGTMFWDDKYGAQGLSPEVISRMRVLMTEESINIPNNSFLLEVDSSIPFLMEEMFRSMSDIRLSDMNVDPPPILRQKSDFQFLLQQMDSDSQ 1598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi219g00035 1598 ProSiteProfiles IQ motif profile. 765 794 IPR000048 GO:0005515
Sebi219g00035 1598 Coils Coil 884 918 - -
Sebi219g00035 1598 Pfam DIL domain 1403 1514 IPR002710 -
Sebi219g00035 1598 CDD MYSc_Myo11 84 727 IPR036018 -
Sebi219g00035 1598 PRINTS Myosin heavy chain signature 100 119 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi219g00035 1598 PRINTS Myosin heavy chain signature 157 182 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi219g00035 1598 PRINTS Myosin heavy chain signature 437 465 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi219g00035 1598 PRINTS Myosin heavy chain signature 204 231 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi219g00035 1598 PRINTS Myosin heavy chain signature 490 518 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi219g00035 1598 ProSiteProfiles IQ motif profile. 790 817 IPR000048 GO:0005515
Sebi219g00035 1598 PANTHER MYOSIN 62 1523 - -
Sebi219g00035 1598 Pfam Myosin head (motor domain) 72 727 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi219g00035 1598 Gene3D - 840 889 - -
Sebi219g00035 1598 Gene3D - 792 839 - -
Sebi219g00035 1598 Gene3D - 740 791 - -
Sebi219g00035 1598 Gene3D Myosin VI head, motor domain, U50 subdomain 320 609 - -
Sebi219g00035 1598 ProSiteProfiles IQ motif profile. 861 890 IPR000048 GO:0005515
Sebi219g00035 1598 SMART MYSc_2a 64 740 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi219g00035 1598 FunFam Myosin heavy chain 260 315 - -
Sebi219g00035 1598 FunFam unconventional myosin-Va 744 792 - -
Sebi219g00035 1598 Gene3D - 447 631 - -
Sebi219g00035 1598 SMART iq_5 812 834 IPR000048 GO:0005515
Sebi219g00035 1598 SMART iq_5 764 786 IPR000048 GO:0005515
Sebi219g00035 1598 SMART iq_5 741 763 IPR000048 GO:0005515
Sebi219g00035 1598 SMART iq_5 837 859 IPR000048 GO:0005515
Sebi219g00035 1598 SMART iq_5 789 811 IPR000048 GO:0005515
Sebi219g00035 1598 SMART iq_5 860 882 IPR000048 GO:0005515
Sebi219g00035 1598 ProSiteProfiles Dilute domain profile. 1213 1535 IPR002710 -
Sebi219g00035 1598 Pfam Myosin N-terminal SH3-like domain 18 55 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sebi219g00035 1598 Coils Coil 980 1090 - -
Sebi219g00035 1598 Gene3D Kinesin motor domain 73 670 IPR036961 -
Sebi219g00035 1598 FunFam unconventional myosin-Va 840 888 - -
Sebi219g00035 1598 CDD MyosinXI_CBD 1164 1558 IPR037975 GO:0007015
Sebi219g00035 1598 FunFam Class V myosin 447 586 - -
Sebi219g00035 1598 ProSiteProfiles Myosin motor domain profile. 70 739 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi219g00035 1598 FunFam Myosin 2 320 437 - -
Sebi219g00035 1598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 793 IPR027417 -
Sebi219g00035 1598 Gene3D - 675 737 - -
Sebi219g00035 1598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 793 890 IPR027417 -
Sebi219g00035 1598 ProSiteProfiles IQ motif profile. 813 842 IPR000048 GO:0005515
Sebi219g00035 1598 Pfam IQ calmodulin-binding motif 744 762 IPR000048 GO:0005515
Sebi219g00035 1598 Pfam IQ calmodulin-binding motif 792 810 IPR000048 GO:0005515
Sebi219g00035 1598 Pfam IQ calmodulin-binding motif 766 785 IPR000048 GO:0005515
Sebi219g00035 1598 Pfam IQ calmodulin-binding motif 863 882 IPR000048 GO:0005515
Sebi219g00035 1598 Coils Coil 923 957 - -
Sebi219g00035 1598 Gene3D - 260 318 - -
Sebi219g00035 1598 SMART DIL_2 1402 1517 IPR002710 -
Sebi219g00035 1598 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 16 65 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sebi219g00035 1598 ProSiteProfiles IQ motif profile. 742 769 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi219g00035 Sebi-Chr219 1221859 1233771 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi219g00035 124 1593 Myosins gene family AT2G31900 72.147 0.0 2204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi219g00035 K10357 - gmx:100817933 2836.6