Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi219g00034 ATGGACCAGTCAACAAATGGAGCTGGACATATGGACCAGGTGTCAAAAACTGATGCAAAGTTGGCAAGTAACTCTGAACCTCAGAAAATAACACCATCAAGCAAGAACATTTCTGATTTCAGTAATCAACACCAAAGTCAAAGGACAAAGATTCCTTCAACTCCTGATCCTGAAACTCACTCACCACAAGGACGTGTGTATCTCAAACGCATTGGTTATGGAGACATTGGAAGTGTGTATCTTGTGGAACTAAGAGGAACTAATGCCCACTTTGCCATGAAAGTAATGGACAAGGAAGCTCTTATAAGCAGAAATAAGCTTCTGCGAGCGCACACAGAGAGGGAGATTCTTGGACTTCTTGATCACCCCTTCTTGCCAACTTCATATTCTTACTTTGAAACTGATAAGTTTTACTGTTTGGTCATGGAGTTCTGTAGTGGGGGTGATCTTCATATTCTTACTCCCTATTGGAGGGAGTGA 480 0.4188 MDQSTNGAGHMDQVSKTDAKLASNSEPQKITPSSKNISDFSNQHQSQRTKIPSTPDPETHSPQGRVYLKRIGYGDIGSVYLVELRGTNAHFAMKVMDKEALISRNKLLRAHTEREILGLLDHPFLPTSYSYFETDKFYCLVMEFCSGGDLHILTPYWRE 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi219g00034 159 MobiDBLite consensus disorder prediction 1 64 - -
Sebi219g00034 159 SUPERFAMILY Protein kinase-like (PK-like) 49 151 IPR011009 -
Sebi219g00034 159 PANTHER FLIPPASE KINASE 1-RELATED 23 153 - -
Sebi219g00034 159 Pfam Protein kinase domain 68 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi219g00034 159 MobiDBLite consensus disorder prediction 1 60 - -
Sebi219g00034 159 ProSiteProfiles Protein kinase domain profile. 65 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi219g00034 159 Gene3D Phosphorylase Kinase; domain 1 66 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi219g00034 Sebi-Chr219 1220166 1220645 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi219g00034 68 153 AGC Kinase Gene Family AT3G12690 86.047 8.21e-47 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Sebi219g00034 Pkinase 4.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi219g00034 - - gmx:100819001 191.43