Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi219g00032 ATGGCTGCAAGGGAAACTGGGGAACTTGAGGAAGCAAAGGACAAGTTGGAGAAGCGTGTTGAGGAGCTTACACGGAGACTGGATATTGAAAAGCACTTGAGGGAACCAAGAGCACCTGACTCCTATCTTACAAAACAAAGATCACTGACAGACAGGCAGCAGGATGCACTTCTCAAGTGTCTCGTGGAAGATATGCGATTTGAGAAAAACAGACCAGCAGTTTCTTGTATTGTTTATAAAGCACTTCTTCATTGGAGATCCTTTGAAGCAGAGAAGACACATATATTTGATAAAATTATTCACGCCATCCGATCATCTATAGAGAGTCAAGAAGGAATCAATGATCTAGCATATTGGCTTTCAACAACTTCAACACTTATGTACACTGCACACTCAAGGCCAGCAATACAACTACGGAAGTGTCACGTAATCGAAACTCTCCTGCCACTCTATTTGGTAAAATGGCACAAGCCACATACTGGTGGTGATGTAAGGTGGGATGCAATTAACATGGTTTCCAAGAGTGGCCCTCTCAATCTTAGCCATTTCAGGCTTCTCAAACGCATTGGTTATGGAGACATTGGAAGTGTGTACCTTGTGGAATTAAGAGGAACTAATGCCCACTTTGCCATGAAAGTAATGGACAAGGCAGCTCTTAGAAGCATAAATAAGCTTCTTGGGGGTGATCTTCATTCTCTTCAACAAAAGCAAACAAACAAGTGTTTCCCTGAAGAAGCTGCAAGATCAAGAATTTCTTATGTTAAGATTTCTTGTGATAGGTTTTATGCTTCAGAGGTTTTGTTGGCTCTTGAGTACCTGCACATGCTTGGCATTGTATACAGAGACTTAAAGCCAGAGAATCTTCTAGTCAGAGATGAAGGGCATATCATGCTCTCAGATTTTGATTTATCACTTCGCTGCTCTGTCAGTCCTATATTAGTCAAGTCTTCACCTACCAATGTAGGCAATGGTGGTGGTGGTGACTCTGGGGGTATGTTGGGTGATGACCAAACAGTGCAAGGCAATGCTCAATCAGATTTTGGCCTATTGGTTGGTGGTGGAAGACATTGTAAACACAGACATGTAAATTCAATCCAATAG 1101 0.4205 MAARETGELEEAKDKLEKRVEELTRRLDIEKHLREPRAPDSYLTKQRSLTDRQQDALLKCLVEDMRFEKNRPAVSCIVYKALLHWRSFEAEKTHIFDKIIHAIRSSIESQEGINDLAYWLSTTSTLMYTAHSRPAIQLRKCHVIETLLPLYLVKWHKPHTGGDVRWDAINMVSKSGPLNLSHFRLLKRIGYGDIGSVYLVELRGTNAHFAMKVMDKAALRSINKLLGGDLHSLQQKQTNKCFPEEAARSRISYVKISCDRFYASEVLLALEYLHMLGIVYRDLKPENLLVRDEGHIMLSDFDLSLRCSVSPILVKSSPTNVGNGGGGDSGGMLGDDQTVQGNAQSDFGLLVGGGRHCKHRHVNSIQ 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi219g00032 366 Coils Coil 2 33 - -
Sebi219g00032 366 SMART serkin_6 183 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi219g00032 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Sebi219g00032 366 Gene3D Transferase(Phosphotransferase) domain 1 226 306 - -
Sebi219g00032 366 Pfam Protein kinase domain 258 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi219g00032 366 SUPERFAMILY Protein kinase-like (PK-like) 171 308 IPR011009 -
Sebi219g00032 366 ProSiteProfiles Protein kinase domain profile. 183 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi219g00032 366 PANTHER FLIPPASE KINASE 1-RELATED 133 225 - -
Sebi219g00032 366 Gene3D Phosphorylase Kinase; domain 1 156 223 - -
Sebi219g00032 366 FunFam Serine/threonine-protein kinase OXI1 229 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi219g00032 Sebi-Chr219 1200295 1203109 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi219g00032 157 353 AGC Kinase Gene Family AT1G79250 54.086 2.82e-75 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Sebi219g00032 Pkinase 5.2e-14 CL0016