Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi218g00104 ATGGAGATGTCACCACCAAATAACCGATTTCCTCAGACTCCGCATTCCAGATTCTCAACCAAGAAGGGACGGAGTGGTTATGAACCATCAGACACAGAGACAGAGTGGCAAGAGATTCCACGTCATGAACGAGAAAGAAAGAACTTGAATTTGGGTCCTGAAGGAACAAAGACTCTGACTTTAATGAACAAAAGCCCCATAGCACTTCACAGGAGGTACCCTTCAAGGTTTGAAAATGAAGTCTCACCACCCTCAACAGGTCCACGAAGAAGACACCAAAGCAAGTCACCCTATAGGCTGCACATAGTAGATGATAGTGATGCTTCATCATCATTCATAGCAGGTTCGAACATGCACAGAAATATCAGTCCTTTGCCAAGACCTGACCTTGGAAGAACTGTGTCTCCTTATAACAGAAATCACGAGCAAAGAACACCTTCTGAGAAGACAAACTACAGGAGGGCAGTGACTGCTCCGAGATTGAGGGAACAACCAAGTAATTATGGGAAAACATTGCAGCAAAATGGGGGGAGAACCAAAGACATGGTTCTGAAACAAAGGGAAGCTTCTCCTTTCAAAGCACCTTCAGTTGGAGAAATCAATGAAATGATAGCACAGGTGAAACTATCCACAAATCCCACTAGTGATTATTCATCAGTGCTAGAAAGTACAGAGTCGATTCAACCAGGTGATCTGTTCTTTTCTCGTGAATGCAATGCCTTGCAAGGGAAGAATTCTTCTTTGCAAAAAAGTCTTCAACAATATGGGTATTTTAGCCCAAGGCCTCCACCAGTGACCACTATCAATCTCATGAGAGCCCCCACTGAAAACGGTAGCGTCAATATGAATAATATCCGAGGAACCTCATCCAATAATGTCTTGTCTCGATCAACCACGGGCACAATAAGTAGAAAGGGTAGTGGTACTGGGAAGCCAAGTTCTAGTGCTAGTGTGACAAGTGATGTTAGTGGAAAGACAAGTGAAAGCATACGGAAATTCATTTCCAACAGAAAAAAGAGCCAGAAAGATGCATGGTTTTCTTGTATGATGAGAACAGGAAACTGTAGGACGACAAGAAAATCACCTGAACGTCGACCAATTGATGAAGCTTCTTTCATTGAAAGGGCAATAGTAGTGGAAAGCCTTCCACAATTCTGGGCAGATAAACATCAACCTGCTTCACTTAATGGCTTCATTTGCAACAAACAAGAAGCTCAACTTCTCAAGGAATTAGTGTCTCAGGGCTCTTGTCCTCATATTTTGCTCAAAGGATCAGCTGGTTCCGGGAAAAGAGAACTAGCAATGGCTCTTCTTCGAGAAATATATGGTGATGCATGTTGTAATCCGTCCCATGATTTAAGACATTTCCCTATTCAGGACAAAAGGACAATGAAAGTATCTGTTCCAATAACATCAAGTTCTCATCACATGGAGCTCAATGTAAATTCAGAACCAAATGCTAAGTATGCTTTAATGGGATTAATCAAAGAAATTAGCAATATATATGCGATTACCCCTGAGGTCAGCAACATTAATTTCAAGTCAGATTATAAAGTAATAGTTCTTTATGAGGTTGACAAAGCAGTAGAGAACATCCAGCACATGATCAAATGGATCATAGACCGCTATTCAGATATATGCAAATTAGTACTCTGCTGTGAAGATGATGCAGACATTATTGGACCTGTGAAAAACCGGTTCAAAGTTATCAAAGTTGATGCTCCTCAAACTCACGAAATTACTGAGGTTCTTATTCAGATAGCAAAGAAAGAGGAAATTGATCTACCCATGAATTTTGCTATGAGGATTGCTACAAAAGCTAATCACAACCTCAGGGAAGCAATCATGGCTCTTGAAGTATGCAAAGCACACAACTATCCATTCTCAGAAGAACAACCAATTCCGGTTGGATGGGAGAATGTTGTAATAGAAGTTGCTGCAGAGATCCTAGCTGATCCATCATTTTCACGGCAAGAAATTTCTCTTTCCATCTTATTTTCTATGCTTATAACTGGCTTAATTGAAGGCTGA 2031 0.4092 MEMSPPNNRFPQTPHSRFSTKKGRSGYEPSDTETEWQEIPRHERERKNLNLGPEGTKTLTLMNKSPIALHRRYPSRFENEVSPPSTGPRRRHQSKSPYRLHIVDDSDASSSFIAGSNMHRNISPLPRPDLGRTVSPYNRNHEQRTPSEKTNYRRAVTAPRLREQPSNYGKTLQQNGGRTKDMVLKQREASPFKAPSVGEINEMIAQVKLSTNPTSDYSSVLESTESIQPGDLFFSRECNALQGKNSSLQKSLQQYGYFSPRPPPVTTINLMRAPTENGSVNMNNIRGTSSNNVLSRSTTGTISRKGSGTGKPSSSASVTSDVSGKTSESIRKFISNRKKSQKDAWFSCMMRTGNCRTTRKSPERRPIDEASFIERAIVVESLPQFWADKHQPASLNGFICNKQEAQLLKELVSQGSCPHILLKGSAGSGKRELAMALLREIYGDACCNPSHDLRHFPIQDKRTMKVSVPITSSSHHMELNVNSEPNAKYALMGLIKEISNIYAITPEVSNINFKSDYKVIVLYEVDKAVENIQHMIKWIIDRYSDICKLVLCCEDDADIIGPVKNRFKVIKVDAPQTHEITEVLIQIAKKEEIDLPMNFAMRIATKANHNLREAIMALEVCKAHNYPFSEEQPIPVGWENVVIEVAAEILADPSFSRQEISLSILFSMLITGLIEG 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi218g00104 676 FunFam Replication factor C subunit 3 384 575 - -
Sebi218g00104 676 MobiDBLite consensus disorder prediction 1 20 - -
Sebi218g00104 676 MobiDBLite consensus disorder prediction 21 51 - -
Sebi218g00104 676 FunFam replication factor C subunit 3 576 634 - -
Sebi218g00104 676 Gene3D - 384 575 IPR027417 -
Sebi218g00104 676 MobiDBLite consensus disorder prediction 1 96 - -
Sebi218g00104 676 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 382 654 - -
Sebi218g00104 676 Gene3D - 577 634 - -
Sebi218g00104 676 MobiDBLite consensus disorder prediction 277 323 - -
Sebi218g00104 676 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 384 623 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi218g00104 Sebi-Chr218 1193274 1196301 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi218g00104 385 654 Core DNA Replication Machinery Family AT5G27740 38.095 1.06e-55 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi218g00104 K10756 - gmx:100795321 954.896