Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi218g00090 ATGAGATCTTCTGTGGGGAACCTTTCTTCCTCCTTTACAAACATTCGTTCAGCATCATCATGGTTCGAGGTCTATGCTGCTTTCTCCACATTGATGATGCTTCTAAGAACTGCAATCAACGATCTCATACCCCACCAAGTTCGATCTTTCATTATCTCAAAGCTAGGAGCTTTCTTCTCACACTGGGGTCATAATAATCAAGTCTCACTTCAGATTGATCAGTATTGGGATGGCAGTACCAACAAACTCTTCCAAGCAGCTAAAGAGTATCTCCCAACAAGGATAACCGACACTTACAGATCGCTCAAAGTGGGGAAACTATCAAAGGAGAAGACCGTTCTAGTGGCTGTGGATAAAGGCCAAGAGGTGGTGGATGAATTTGAAGACATCAAGCTTACATGGAAGCTTGTTGAAAATATCAAAACGGATCGCAGGTCAAAAGAAATTGAGGAGAATTCATTTGTACTAAGCTTTGATGAGAAGCATAGAGAGAAAGTAATGAAGAAGTATATTTCTTATGTTCTGAGTACTTACCAGGCCATGAAAGCAGAACAGAGGACTCTTAAGATCCATTCAATGTCTTGCAAGCATTGGAAACAGAGTGATTTAACACATCCAGCCTCATTCGACACACTTGCCTTGGATCCCGAGCTAAAGAAGGGTATCATTGATGATTTAGATCGGTTTTTGAGGAGGAAAGAGCTCTACAAGAAAGTGGGTAAGCCATGGAAACGTGGTTACCTTTTGTATGGGCCACCAGGAACTGGAAAATCTAGCCTTATTGCAGCTATGGCCAACTACTTGAAATTTGATGTGTATGATTTGGAGTTAAGCTCTGTGTATTCCAATTCAGACCTCATGCGAGCCATGAGGGAGACATCTAACCAATCCATCATCGTGATTGAAGACATAGACTGCAATAAAGAGGTGCTTGTTCGATCACCAACAGAGAAAGTTTCAGACTCTGACTCAGACTCTGACCACCCGCCTGTCAAGGTTGTGAGTATGACTAGGGGGTTTACTCTTTCGGGTCTGCTTAACTACATGGATGGCTTGTGGTCAAGCTGTGGAGAAGAGCGAATTATAATATTTACAACAAACCACAGAGACAAAATAGACCCAGCATTGCTGCGCCCTGGTAGAATGGATATGCACATTCACTTGTCCTTCCTTAGAGCCAAGGCATTTCGAATTTTAGCTTACAATTATTTGGGTATTGAAGGACATCACCCTCTCTTTGAACAAATTGAAGAGCTATTGGAAAAAGTAGAGGTCACCCCTGCAGTAGTGGCAGAGCATCTGTTGAGAAGTGAGGATGCTGATGTTGCTTTGGAAGGACTCCTTAACTTTCTCAAAGAAAAGGATATGAATAGCCTATTTTCAGATTTATGA 1392 0.4203 MRSSVGNLSSSFTNIRSASSWFEVYAAFSTLMMLLRTAINDLIPHQVRSFIISKLGAFFSHWGHNNQVSLQIDQYWDGSTNKLFQAAKEYLPTRITDTYRSLKVGKLSKEKTVLVAVDKGQEVVDEFEDIKLTWKLVENIKTDRRSKEIEENSFVLSFDEKHREKVMKKYISYVLSTYQAMKAEQRTLKIHSMSCKHWKQSDLTHPASFDTLALDPELKKGIIDDLDRFLRRKELYKKVGKPWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSSVYSNSDLMRAMRETSNQSIIVIEDIDCNKEVLVRSPTEKVSDSDSDSDHPPVKVVSMTRGFTLSGLLNYMDGLWSSCGEERIIIFTTNHRDKIDPALLRPGRMDMHIHLSFLRAKAFRILAYNYLGIEGHHPLFEQIEELLEKVEVTPAVVAEHLLRSEDADVALEGLLNFLKEKDMNSLFSDL 463
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sebi218g00090 463 Pfam ATPase family associated with various cellular activities (AAA) 248 388 IPR003959 GO:0005524|GO:0016887
Sebi218g00090 463 Gene3D - 198 386 IPR027417 -
Sebi218g00090 463 PANTHER BCS1 AAA-TYPE ATPASE 26 455 - -
Sebi218g00090 463 SMART AAA_5 243 392 IPR003593 GO:0016887
Sebi218g00090 463 CDD RecA-like_BCS1 222 388 - -
Sebi218g00090 463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 439 IPR027417 -
Sebi218g00090 463 Gene3D - 387 459 - -
Sebi218g00090 463 Pfam Domain associated at C-terminal with AAA 43 137 IPR025753 -
Sebi218g00090 463 ProSitePatterns AAA-protein family signature. 360 378 IPR003960 GO:0005524|GO:0016887
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sebi218g00090 Sebi-Chr218 1083584 1085088 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi218g00090 245 388 Calmodulin-binding Proteins AT3G56690 31.579 1.31e-10 62.0
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi218g00090 - K08900 gmx:100787726 627.476