Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi218g00082 ATGAAGAGGTGTTCCATTTCAAACGCTATCAGGCGATATGAGAGTGTGCACTTGAATATGATAGATGGTGTGGCTAAGGTCCTTGGAGTCCTTGCTTCTGTTGGAGGAGCTTCAGTCATTACCCTTTACAAGGGACCTACCATTTATACTCCACATTCAGCATCCCACCAGGAAAATTTCTTGTCTGCATTTGGGGATGCCACAGGGAAAAACTGGAACTTGGGTGGCATCTTTCTGTTTGGTCACAGCTTATGTTGGTCTGGTTGGATTGTGATGCAAGCATTTGTTCTTAAAAAATACTCAGCCCCACTCACAGTTTCTGCCTTTACTTGCTTCTTTGGTATTGTGCAATTTGTGACAATTGCAACCTTTTTCGAGAAGGATCCAAAAGCCTGGCAGCTCAATTCTAGAAGAGAGATCTACAGTGTTTTGTACTCGGGACTGGTGACTTCAGGGCTGGCAGCAGCAATACAGATATGGACTATTGGCAAGGGAGGACCAGTGCTTGCTTCAATTTATCTGCCCTTACAGACATTACTCGTAGCATTGATGGCATCCATTGTTTTTGGCGAAGAATTCTTTTTGGGAGGGATTATCGGAGCTTTCTTAATTATATCTGGCTTGTACCTTGTTGTATGGGGAAGAAGTCAAGAAACCAAGCAAGGCAGTGTTCTCCCAACTTCTGTAATGGAAGCAGAGTTGGATCCCGAGCAGCAGCAGATGATGGAAGGAAGTTTCTCCCGAACAATGCAAATTGATCCCAAAAGGGCTCGATTTCCATGCTCCATTGTGTGGTCACCACTTCCTGTGATCTCATGGTTCATTCCTTTCATTGGTCACATTGGCATTTGCAGAGAGGATGGGGTGATATTGGATTTTGCAGGGCCTAATTTTGTGTGTGTGGACAATTTTGCATTTGGAGCTGCCACTCGCTATCTTCAAATAACCAAAGAAAAGTGTCCCATCCCTTTAGGCCAATCTACATACAAGGGTGAGGAACATTACATGCAGGATGAAACTGGAGGAGACTTGAGGACTTGGGATGATGCTCTACGGAAGAGCACTCAAGAATTCCAACATCGAGCTTACAATCTCTTTACATGCAACTGCCACTCGTTTGTTGCCAATAATTTGAACAGGCTAGGCTTTTTGTCTGGTGGATGGAATGTGGTGAACCTTACAATTTTCATTTTATTCAATGGACGTTGGGTCAGCAAAACATCTATGCTGCGAACTATCTTACCATTTGTGGTAGTATTTTTTCTTGGGGTCACATTGGGGGGCTTCACCTTCCTAAAATTTTGGTTCCTATTCGCTTCCGTTCTTATTGGTTGGTTCCTTCTTGGTACTTACTGTTTCAAGAATATGATTCAGTTGTAG 1380 0.4348 MKRCSISNAIRRYESVHLNMIDGVAKVLGVLASVGGASVITLYKGPTIYTPHSASHQENFLSAFGDATGKNWNLGGIFLFGHSLCWSGWIVMQAFVLKKYSAPLTVSAFTCFFGIVQFVTIATFFEKDPKAWQLNSRREIYSVLYSGLVTSGLAAAIQIWTIGKGGPVLASIYLPLQTLLVALMASIVFGEEFFLGGIIGAFLIISGLYLVVWGRSQETKQGSVLPTSVMEAELDPEQQQMMEGSFSRTMQIDPKRARFPCSIVWSPLPVISWFIPFIGHIGICREDGVILDFAGPNFVCVDNFAFGAATRYLQITKEKCPIPLGQSTYKGEEHYMQDETGGDLRTWDDALRKSTQEFQHRAYNLFTCNCHSFVANNLNRLGFLSGGWNVVNLTIFILFNGRWVSKTSMLRTILPFVVVFFLGVTLGGFTFLKFWFLFASVLIGWFLLGTYCFKNMIQL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi218g00082 459 Pfam EamA-like transporter family 75 212 IPR000620 GO:0016020
Sebi218g00082 459 PANTHER UNCHARACTERIZED 236 458 IPR008496 -
Sebi218g00082 459 Pfam Protein of unknown function (DUF778) 268 317 IPR008496 -
Sebi218g00082 459 Pfam Protein of unknown function (DUF778) 327 403 IPR008496 -
Sebi218g00082 459 SUPERFAMILY Multidrug resistance efflux transporter EmrE 111 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi218g00082 Sebi-Chr218 971049 977172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi218g00082 9 250 Nodulin-like Gene Family AT1G75500 50.602 1.01e-79 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi218g00082 K20726 - gmx:100527909 417.157