Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi218g00058 ATGATGGAGTCGATGGAGTCATGTGTCCCACCAGGTTTTCGGTTCCACCCAACAGATGAAGAGCTTGTTGGTTATTATCTCAGGAAGAAAGTTGCTTCTCAGAAGATTGACCTTGATGTTATCAGAGAGATCGATCTATATCAGAGATGCAGGATTGGGTATGAAGAGCAGAATGAGTGGTATTTCTTTAGCCACAAAGATAAGAAGTATCCAACAGGGACAAGAACTAACAGAGCTACAATGGCTGGGTTCTGGAAGGCAACAGGAAGAGATAAGGCAGTATATGACAAAATGAAACTAATTGGGATGAGGAAGACACTTGTTTTCTACAAAGGAAGAGCCCCTAATGGACAGAAAACTGACTGGATCATGCATGAGCCACTAAAGTCTGAATATTCACCAAAGCACGAGGAAGGATGGGTTGTGTGCAGGGCATTCAAGAAAAGAACCACCAATGGCCAAACGAAGGCTATTGAAGGATGGGATACAAGCTACTTCTATGATGAAGCAAGTGGGGTCAGCTCAGTGGTGGATCCAATTGATCTCATTTCAAGACAACCTCAAAGCTTTTTAGCTCAAAATTTCTTGTGTAAGCAAGAGATAGAAGCAGACAACTTAAGCATCTGCATGCAACCAGAGCAATTTGTACAGCTTCCTCAACTAGAAAGCCCTTCTTTGCCATTAGTGAAAAGGCCAAGCACAGTGTCCCTAATATCAGACAATAATGAAGATGATGATCCAAACAGGTTATTATCCAACAACACACAGAAAGTGACTGATTGGAGAGCTCTTGACAAGTTTGTGGCTTCTCAACTGAGTCAAGAAGACAGGCTTGAAACTAATGCACTGACAAGCTTTGAAGCTCATACTAGCTCAGACATGGCCTTGCTGCTACTGCAGAGTAGTAGGGATGAAGGGAACAAGTTAAGCCCTTTTCTAAATCCAAGCTCAGACTGTGATATTGGGATATGCGCTCTGTCGAGTGGCTCTCATGCCTGCCTAGAGGAAGAAGACATGGCAGCTGTGACAGCAGAGACAGTGTGA 1044 0.4349 MMESMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYQRCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKMKLIGMRKTLVFYKGRAPNGQKTDWIMHEPLKSEYSPKHEEGWVVCRAFKKRTTNGQTKAIEGWDTSYFYDEASGVSSVVDPIDLISRQPQSFLAQNFLCKQEIEADNLSICMQPEQFVQLPQLESPSLPLVKRPSTVSLISDNNEDDDPNRLLSNNTQKVTDWRALDKFVASQLSQEDRLETNALTSFEAHTSSDMALLLLQSSRDEGNKLSPFLNPSSDCDIGICALSSGSHACLEEEDMAAVTAETV 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi218g00058 347 Pfam No apical meristem (NAM) protein 10 126 IPR003441 GO:0003677|GO:0006355
Sebi218g00058 347 ProSiteProfiles NAC domain profile. 9 148 IPR003441 GO:0003677|GO:0006355
Sebi218g00058 347 Coils Coil 341 347 - -
Sebi218g00058 347 SUPERFAMILY NAC domain 5 148 IPR036093 GO:0003677|GO:0006355
Sebi218g00058 347 Gene3D NAC domain 18 152 IPR036093 GO:0003677|GO:0006355
Sebi218g00058 347 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi218g00058 Sebi-Chr218 683825 686281 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi218g00058 2 326 NAC Transcription Factor Family AT2G18060 59.621 6.31e-140 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi218g00058 NAM 1.7e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi218g00058 - - aprc:113869508 565.844