Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi218g00051 ATGCTGGTAAAATTGTTCTTATCTGAGGATTGTCCTTCAAAAGTTAGTCAGAAATCGCAAGATCATCTTCAAGTAAAGACATCGTCAATGTTGCCTTGGAGTACTAATGAATATGATGATGATTTACCACCCGGGTTTGAAGGCAATCATTTCCTGAGCCAACCAAAGGCTGTACTCTCTGACATTTCTCAGATTAGATGGAAATGCCCTCCTCTGTTTGCTTTCAGTAATCATTGGCGCGTTGCAGCTGGTGAAGAAAGTGGGGAGAAAAATAATCAGAAGCTAAGAGAAATGAGAGTGCTTGAAGCAGTTTATCCTCGTCCTTCTGCCATTCCTCCCAGCCCTTCGGTTTCTTTCGAGGTAGGGGCAGAAGATTATGATGATAGCCTCACTCCTCTCATCCCTATCATTCCTATTGAGGAAGAAGAATCCATGGATATTAATGGAGTTGCAGTCACAAAACCTGTGGACATTCCCAACAATTTGCAGTCACAATGCAAAGCCTCCTCTGCTAGTGTTCCCTCACCTGTCTGTGGAAAGCCTGTCCCTGGGATATCTCCTAGTTCGGAGGCAGATTTAGCTGCAGCTTCTACTGTCATAACAGCCATCATGAAAAGTAATGAGCAAGGAAGCTTGATTGATATGGATCTACTCCTTAAAATATTTAATGATCCAACAATGATTGGGAAATTAATTAACGAACATAGAACTGCAGCTTCCCCTGTTAGTGCATCCTCAAATAATGTGACTGTACCCACTTCTGAATCAAAATCTGTTACTTTATCAGTTCCATTGTCTAGACCTAAACCTGAGGTGGCAGCTTCTGGAACTACACCCATAAGAACAGTGGGTCTGTTACCTGTTTCTGGTCCAAAGCAAGCAACTCCATCAGAATCATTTTTGCCCCCAACACCTGATAAGCAAGTAATTCCACCTGTTTCAGTGTCTGCCTCTACTTTTGATAAGCCAACAACTCCATCACTTCCTTTGTTTAGGCCTGTGTCTGGTAAATCAGCAGAAAGTTACTCAGTTACATTGCATCAACCTCCATCTCCAACTCCATCTACTCCTATGCCTCATATGCACAAGCCTGGCAACAAAAATATTCCCCATTTGTCAAATGGAGTGATGCCGACTTTAAATACCCAATCTCCTCAACAAGATACAGTTCTGTCATCTGGGGTAAAGCGAGCAGCATCATTGGCTTTGCCTTCTGGTTCTGTTAATTTGCATGCTGTTGCAAACCAGGTGCTGTCCACTGCTAGTACTGTGCCTCATCAACCAGGTACTGGTTCTGGTTCTGGTTCAGCATTTGGTGTGAAGGAGGCCAACTATTATAAGAACCTTATTAGACAACATGGTGCAGATAAACAAGATGTGCAGGACTCACAAATAGGTATCCGTCATAATAATTTCCAAGATATGAAATCGGTACATAACATCATTAAACCAGGGGAAGTGATATTCAAAACTCAGAAACCTTGCATATACTTTAAAAGCTCAAGAGGGTGCCGAAATGGTTCCAATTGCCCTTATCAGCATGATATGTCGGCTCCATTGGGAGCTAGTAATGTCCTAGTGGCCCAAAGTGCAAAAAGAGTGAAACTAGCACCAGAAATTAAGAGTTGGATATAA 1635 0.4232 MLVKLFLSEDCPSKVSQKSQDHLQVKTSSMLPWSTNEYDDDLPPGFEGNHFLSQPKAVLSDISQIRWKCPPLFAFSNHWRVAAGEESGEKNNQKLREMRVLEAVYPRPSAIPPSPSVSFEVGAEDYDDSLTPLIPIIPIEEEESMDINGVAVTKPVDIPNNLQSQCKASSASVPSPVCGKPVPGISPSSEADLAAASTVITAIMKSNEQGSLIDMDLLLKIFNDPTMIGKLINEHRTAASPVSASSNNVTVPTSESKSVTLSVPLSRPKPEVAASGTTPIRTVGLLPVSGPKQATPSESFLPPTPDKQVIPPVSVSASTFDKPTTPSLPLFRPVSGKSAESYSVTLHQPPSPTPSTPMPHMHKPGNKNIPHLSNGVMPTLNTQSPQQDTVLSSGVKRAASLALPSGSVNLHAVANQVLSTASTVPHQPGTGSGSGSAFGVKEANYYKNLIRQHGADKQDVQDSQIGIRHNNFQDMKSVHNIIKPGEVIFKTQKPCIYFKSSRGCRNGSNCPYQHDMSAPLGASNVLVAQSAKRVKLAPEIKSWI 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi218g00051 544 MobiDBLite consensus disorder prediction 238 360 - -
Sebi218g00051 544 MobiDBLite consensus disorder prediction 311 325 - -
Sebi218g00051 544 ProSiteProfiles Zinc finger C3H1-type profile. 489 517 IPR000571 GO:0046872
Sebi218g00051 544 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 3 537 - -
Sebi218g00051 544 MobiDBLite consensus disorder prediction 238 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi218g00051 Sebi-Chr218 608168 610167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi218g00051 64 135 Homeobox Transcription Factor Family AT4G02560 43.056 5.74e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Sebi218g00051 None None None