Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi218g00046 ATGGCCATCAACAAAAAGTCCAATAAACTACCACAAGCTGTTGTTCTCAAGCAAATTCTCAAGAGATGCTCAAGTTTTGGAAAGAAGCAGAGCTACAATGAAGAGGGTCTCCCTGATGATGTGCCTAAAGGCCATTTTGCTGTTTATGTTGGGGAGAACAGAACCAGATACATTATCCCAATTTCATGGCTGGCTCACCCACAGTTTCAAAATCTGCTCCAAAGAGCTGAGGAAGAATTTGGCTTCAATCATGATATGGGACTTACCATCCCCTGTGATGAGGTTGTTTTGAGTCCCTAA 300 0.4267 MAINKKSNKLPQAVVLKQILKRCSSFGKKQSYNEEGLPDDVPKGHFAVYVGENRTRYIIPISWLAHPQFQNLLQRAEEEFGFNHDMGLTIPCDEVVLSP 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi218g00046 99 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 31 95 IPR003676 GO:0009733
Sebi218g00046 99 Pfam Auxin responsive protein 18 97 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi218g00046 Sebi-Chr218 566646 566945 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi218g00046 6 94 Calmodulin-binding Proteins AT4G34750 46.067 6.30e-20 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi218g00046 K14488 - gmx:100798840 186.808