LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi218g00029	ATGTTGTTATTCCCTAGGTTTGCAGGTGGAAAATGGCTAGGATTTGTGACAGCCATATGCTTAACAATCTCTCTGTGGGCCAAAGATGTTGGCAAGGCTTTTGGTGTTTTATCTGGTCTTGCTTCTGATCGTTGGCCAACTTCAGTTATTCTCATGATTGGAGCCATCATGGGATTCATAGGCTATGGAGTTCAATGGCTGTGTTGTCAGCCAGAGAATCACTCCACTCCCTTATTGGCTGATGTGTATATTCTTGTGTATGGGTGGAAACAGCACAACATGGATGAACACAGCAGTGCTTGTGACTTGTATGAGGAATTTTCCACAAAACCGTGGCCCAATTTCTGGTATTCTCAAGGGTTATGTGGGACTCAGCACAGCAATCTTTACAGACATATGCACTGCTATGTTTTCTTCAGACCCTTCCAAGTTTCTTCTAATGCTTACCATTCAGGACTTCTTGTCCTATTAGCCATGCCACTCCTTGTTCCTTTATACTTGGCCATCTTCAAATCAAATCTTAATGTTGACCAAGAACAACAACAGATTCATGAACCATTGCTAGCCCAAAAAATTTCAGCAGAAAAGGAAGAGGGACAGCAGGGTCATGAAGTAAATGCAGGCACAAAAGTGGAAGAAGTTGAAACAAAACAAAAACCTGTGTTAGGAGAAGAACATACCATCATTGAAATGCACTTGGTTACAACTGATGTTTCTATTTTCATTTCCTTCATTAGCATATGGGGTTTCTTTGGACGCATTATTTCTGGCTCACTATCAGAATACTTCATCAGAAAATCAGGCATGCCAAGGCTAGTTTGGAATGCTGCTTCTCAAGTATTGATGGCTGTGGGTTACATTGCAATGGCATTGGCTTTGCCAGGATCACTTTACATTGGTTCAATGTTAGTGGGAATATGTTATGGAGTCCGTCTTACTATAACCCCAGCAGCAGCTTCAGAGCTATTTGGACTCAAATACTATGGTTTATTATATAACATCCTCATTCTCAACCTTCCTATTGGTTCATTCCTCTTTTCTGGTCTTATTGCTGGTTATCTTTATGATATGGAAGCCACTAGTGTGCCTGGAGGGGGAAACACTTGCATTGGAGCACATTGTTACATGCTTGTGTATGTGATTATGGCATTTGCTTGTGTCCTGGGATGTGGATTGGACCTGCTGTTGACAGTTAGAACAAAGAAAATCTATGCCAAGATACACCAAGAGAGGAGTCTAGTCAATTCCCAAGTTCAAAGCTGA	1263	0.4141	MLLFPRFAGGKWLGFVTAICLTISLWAKDVGKAFGVLSGLASDRWPTSVILMIGAIMGFIGYGVQWLCCQPENHSTPLLADVYILVYGWKQHNMDEHSSACDLYEEFSTKPWPNFWYSQGLCGTQHSNLYRHMHCYVFFRPFQVSSNAYHSGLLVLLAMPLLVPLYLAIFKSNLNVDQEQQQIHEPLLAQKISAEKEEGQQGHEVNAGTKVEEVETKQKPVLGEEHTIIEMHLVTTDVSIFISFISIWGFFGRIISGSLSEYFIRKSGMPRLVWNAASQVLMAVGYIAMALALPGSLYIGSMLVGICYGVRLTITPAAASELFGLKYYGLLYNILILNLPIGSFLFSGLIAGYLYDMEATSVPGGGNTCIGAHCYMLVYVIMAFACVLGCGLDLLLTVRTKKIYAKIHQERSLVNSQVQS	420

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi218g00029	420	PANTHER	UNCHARACTERIZED NODULIN-LIKE PROTEIN	27	76	-	-
	Sebi218g00029	420	Pfam	Nodulin-like	26	78	IPR010658	-
	Sebi218g00029	420	Gene3D	MFS general substrate transporter like domains	215	411	IPR036259	-
	Sebi218g00029	420	SUPERFAMILY	MFS general substrate transporter	231	402	IPR036259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi218g00029	Sebi-Chr218	353496	355336	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi218g00029	11	77	Nodulin-like Gene Family	AT4G34950	43.158	3.22e-12	66.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi218g00029	-		-	cit:102624072	285.419