Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi217g00061 ATGGAAATTCTGTGCTTGTTGCATCTTCTGCTAGCTTGGTATGTGTCAAATTGTGAGCTTGTGGGTGCTGAGTTCCAGGACCAAGCTATATTACTTGCCATCAACCAAGAGCTTAGAGTTCCTGGATGGGGTGAAGCCAACAACACAAATTACTGCACTTGGCAAGGAGTAAGCTGTGGTAATCATTCAATGGTGGAGAAGCTTGATCTCGCTCACAAGAATCTTCGAGGTAATGTATCTTTAATGTCTGAGCTCAAAGCTTTGAAGCGGCTTGACCTTTCAAATAATAACTTTGATGGATTGATTCCTCCTGCTTTTGGAAATTTATCTGATCTTGAGGTTCTAGATTTGTCTTCAAATAAGTTTGAAGGTTCAATTCCACCACAGTTGGATGGTCTCAAAAACCTTAAATCATTAAACCTTTCCAATAATGTGCTTGTGGGAGAAATACCAATGGAACTTCAAGGCCTAGAGAAATTGCAGGATTTGCAAATTTCTAGTAATCATTTGAGTGGTTTTATACCTTCTTGGGTGGGTAATTTGACCAATTTGAGAGTTTTTACTGCTTATGAGAATCGTTTAGGTGGCAGGATTCCAGATAATCTAGGCTTGATTCCTGATCTTCAAATACTTAACCTGCACTCTAACCAGCTTGAAGGCCCAATACCAGCCAGCATTTTTGCTTCAGGGAAGCTAGAAGTTCTGATAGCTTTAAATTTGAGCTTCAATCATCTTCATGGACCACTGCCTCCTGAATTAGGAAAACTGGACAAACTTGTTTCTCTGGATGTTTCAAACAATCGGCTCTCAGGTAATATCCCTGCTGAGCTCAAGGGAATGTTGAGCTTGATAGAGGTGAATTTCTCAAATAATCAGTTTGGAGGTCCTGTACCAACTTTTGTACCATTCCAGAAGAGTCCTAGTTCAAGTTTTCTGGGCAATAAAGGACTTTGTGGAGAGCCATTGAACTCTACATGTGGAGATCTTTATGATGATCACAAGAGTTACCATCACAGGGTTTCTTACAGAATCATACTGGCTGTAATTGGTTCTGGTTTGGCAGTTTTTATGTCAGTAACTGTAGTTGTCTTGCTGTTTATGCTCAGAGAGAGGCAAGAAAAAGTAGCCAAAGATGCTGGGATTGTTGATGATGCAATCAATGACAAACCAACTATAATAGCAGGAAGTATTTTTGTTGATAATCTAAAACAAGCAGTAGACCTTGATGCTGTTGTTAAAGCAACTCTGAAGGACTCTAATAAGCTTAGCAGTGGAACTTTCAGCACAGTTTACAAGGCAATCATGCCTTCTGGGGTGGTCTTATCTGTTAGGAGACTGAAGTCCATTGACAAGGCAATAATCCACCACCAGAACAAGATGATTAGAGAGCTTGAAAGGCTGGGAAAAGTCTGTCATGATAATCTAGTGCGGCCGATTGGTTATGTTATTTATGAAGATGTTGCTCTTCTCTTGCATAATTATTTTCCAAATGGAACATTGGCTCAGCTTCTTCATGAATCTACCAGGCAACCTGAATATCAGCCTGACTGGCCTGGTAGGTTATCCATTGCCATTGGAGTGGCAGAAGGTTTAGCTTTCCTTCATCATGTGGCAATTATCCATCTTGACATTTCTTCTGGCAATGTTCTGTTGGATGCAAACTTCAAGCCATTGGTTGGGGAGATTGAGATTTCAAAACTTCTGGATCCAACCAAAGGCACTGCAAGTATTAGTGCAGTTGCTGGTTCCTTTGGTTACATACCCCCAGAATACGCGTACACAATGCAAGTCACAGCACCAGGAAATGTTTACAGCTATGGTGTTGTCCTGTTGGAAATCCTTACAACTCGACAACCAGTTGATGAGGATTTTGGTGAAGGTGTAGATTTGGTGAAGTGGGTTCATAGTGCTCCAGTAAGAGGGGAAACTCCAGAGCAGATACTGGATGCAAGGCTTAGCACAGTTTCCTTTGGTTGGAGGAAAGAAATGCTTGCTGCTCTGAAGGTTGCACTGCTTTGCACTGACAATACACCAGCCAAACGACCAAAAATGAAGAATGTAGTAGAAATGCTTCGAGAGATAAAGCAAAACTGA 2094 0.4117 MEILCLLHLLLAWYVSNCELVGAEFQDQAILLAINQELRVPGWGEANNTNYCTWQGVSCGNHSMVEKLDLAHKNLRGNVSLMSELKALKRLDLSNNNFDGLIPPAFGNLSDLEVLDLSSNKFEGSIPPQLDGLKNLKSLNLSNNVLVGEIPMELQGLEKLQDLQISSNHLSGFIPSWVGNLTNLRVFTAYENRLGGRIPDNLGLIPDLQILNLHSNQLEGPIPASIFASGKLEVLIALNLSFNHLHGPLPPELGKLDKLVSLDVSNNRLSGNIPAELKGMLSLIEVNFSNNQFGGPVPTFVPFQKSPSSSFLGNKGLCGEPLNSTCGDLYDDHKSYHHRVSYRIILAVIGSGLAVFMSVTVVVLLFMLRERQEKVAKDAGIVDDAINDKPTIIAGSIFVDNLKQAVDLDAVVKATLKDSNKLSSGTFSTVYKAIMPSGVVLSVRRLKSIDKAIIHHQNKMIRELERLGKVCHDNLVRPIGYVIYEDVALLLHNYFPNGTLAQLLHESTRQPEYQPDWPGRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDANFKPLVGEIEISKLLDPTKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRQPVDEDFGEGVDLVKWVHSAPVRGETPEQILDARLSTVSFGWRKEMLAALKVALLCTDNTPAKRPKMKNVVEMLREIKQN 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi217g00061 697 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 495 697 - -
Sebi217g00061 697 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 25 173 - -
Sebi217g00061 697 SMART LRR_typ_2 157 181 IPR003591 -
Sebi217g00061 697 SMART LRR_typ_2 205 229 IPR003591 -
Sebi217g00061 697 SMART LRR_typ_2 109 132 IPR003591 -
Sebi217g00061 697 SMART LRR_typ_2 256 279 IPR003591 -
Sebi217g00061 697 SMART LRR_typ_2 133 156 IPR003591 -
Sebi217g00061 697 SMART LRR_typ_2 85 108 IPR003591 -
Sebi217g00061 697 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 386 494 - -
Sebi217g00061 697 PRINTS Leucine-rich repeat signature 88 101 - -
Sebi217g00061 697 PRINTS Leucine-rich repeat signature 109 122 - -
Sebi217g00061 697 Pfam Protein tyrosine and serine/threonine kinase 419 691 IPR001245 GO:0004672|GO:0006468
Sebi217g00061 697 CDD STKc_IRAK 422 694 - -
Sebi217g00061 697 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 66 691 - -
Sebi217g00061 697 Gene3D Transferase(Phosphotransferase) domain 1 495 697 - -
Sebi217g00061 697 SUPERFAMILY Protein kinase-like (PK-like) 416 694 IPR011009 -
Sebi217g00061 697 FunFam Leucine-rich repeat receptor-like protein kinase 234 328 - -
Sebi217g00061 697 Gene3D Ribonuclease Inhibitor 20 83 IPR032675 -
Sebi217g00061 697 Gene3D Ribonuclease Inhibitor 84 334 IPR032675 -
Sebi217g00061 697 ProSiteProfiles Protein kinase domain profile. 416 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi217g00061 697 Gene3D Phosphorylase Kinase; domain 1 386 494 - -
Sebi217g00061 697 Pfam Leucine rich repeat 87 146 IPR001611 GO:0005515
Sebi217g00061 697 SUPERFAMILY L domain-like 43 322 - -
Sebi217g00061 697 ProSitePatterns Tyrosine protein kinases specific active-site signature. 539 551 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi217g00061 Sebi-Chr217 1281633 1284394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi217g00061 77 696 Receptor kinase-like Gene Family AT2G41820 67.095 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sebi217g00061 PK_Tyr_Ser-Thr 1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi217g00061 - - gmx:100805933 951.429