Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi217g00023 ATGGAGTTGCAGGGTACTAATGCAGGTATTGCAGTGGATAACAAGAGGGGGGTATGTTTGGTTTGGGAAGATTTGACAGTGGTGGCACCCAATTTTAGCAGTAGACCAGAAAGGAAACTGTTAAATGGGTTAAGTGGTTATGCAGAACCCAACCGGATTATGGCAGTCATTGGTCCTTCAGGATCTGGGAAAACAACTTTACTTGATGCCCTGGCTGGAATACTACCCCCCAATGTTAGCATGACTGGAAATGTACTACTCAATGGGACTAAAAGAAGTACAGGCTGTAGAGATATTACATATGTTACTCAAGAAGATTATTTCTTAGGAACACTAACAGTGAGAGAAACCCTCACATATGCTGCTTATTTGAGACTTCCGGCTAATAAGACTAAAAATGAGATTGATAAGGTGGTAACTAAGACATTGGATGAAATGGGTCTGCAAGATATCGCAAATAGTAGACTTGGGAATTGGCATTTAAGAGGCATAAGTAATGGAGAGAAAAGAAGACTTAGCATAGGCATTGAGCTCTTAACTCAACCTCATATAATGTTTATGGATGAACCCACAAGTGGGTTGGATAGTGCAGCTGCTTTCTATGTGATATTATCTCTAAGAAGCATAGCCCATGATGGACGAATAGTTATTTGCTCTATTCACCAACCAAGTAGTGAAGTTTTCAGTCTTTTTGATGATTTGGTCATCCTTGCAGGAGGTGAAACTGTATATTTTGGGGAAACAACTATGGCTATAAAGTTCTTTGCTCATGCAGGCTTCCCATGTCCAACAAGGAAAAATCCTCCAGAGCACTTCCTTCGATGTGTTAGCCCAGAGTTTGATAGGGTTGCAATCTTTATGCTATCCAAAATTGTAAATGAAGCATCATCATCAAGTTCTCTACAGAATATGACAACAGAGGAGATTAAATCAAAACTTATCAAGAACTACAAGAATTCCACACATTCAGTAGATGCAAGAAACAAAATCAAAGAAATCAAACTAAGTGAAGAGTCTTTCATTGGGAGAAAATATGAGATTAGCAGGATGAAGCAACTATGCACATTGACAAATAGATCATTCCTAAATATGAACAGAGACATTGGTTACTACTGGTTAAGGATTTTTTTCTTTATCTTGGTATCAGTGAGTGCTGGTTTTCTTTATTTCAACATAGGAACAAGTAATGAATCAATCTTGTCGAGAGGCAAATTTGATGTATTCATCTATGGCTTCATGATCTTTGTGTGTGTAGGAGGGTTACCTTTTTACCTTGAGGAATTAAAGGTCATCAAACGTGAAAGGTTTGGGAGACATTATGGAGAGGCCATCTATGTATTGTCACATTTTCTCTCATCATTACCTTTTGTATTTGCAATTACCCTCTCTTCAGGAACAACACTTTACCACATGGTGAAATTTCATCCAGGCTTCTCTCATTACTGCTATTTTACCATAAACCTATTTCTGTGCATTTCTGTTGCAGAAAGCTGCATGCTATTTGTTGCAGCACTTATGTCCAACCAATTGCTAGCCGTAGGAACTGCAGCAGGGGTAACTGTATTCATGATGATGCCATCAAACTTATTCAGACGGTTAATAGACCTTCCAAAATTTTTTTGGCGCTACCCAATGTCCTACATCAGCTACATTTCATGGTCAATACAGGGCCAATTCAAAAATGACCTGATTGGACTTGAATTTAAAAAACGAGTTCTTGGGGACGCTAAGATAAAGGGTGAAGTTGCTCTTTTTCTTGGCGCTTAA 1767 0.3865 MELQGTNAGIAVDNKRGVCLVWEDLTVVAPNFSSRPERKLLNGLSGYAEPNRIMAVIGPSGSGKTTLLDALAGILPPNVSMTGNVLLNGTKRSTGCRDITYVTQEDYFLGTLTVRETLTYAAYLRLPANKTKNEIDKVVTKTLDEMGLQDIANSRLGNWHLRGISNGEKRRLSIGIELLTQPHIMFMDEPTSGLDSAAAFYVILSLRSIAHDGRIVICSIHQPSSEVFSLFDDLVILAGGETVYFGETTMAIKFFAHAGFPCPTRKNPPEHFLRCVSPEFDRVAIFMLSKIVNEASSSSSLQNMTTEEIKSKLIKNYKNSTHSVDARNKIKEIKLSEESFIGRKYEISRMKQLCTLTNRSFLNMNRDIGYYWLRIFFFILVSVSAGFLYFNIGTSNESILSRGKFDVFIYGFMIFVCVGGLPFYLEELKVIKRERFGRHYGEAIYVLSHFLSSLPFVFAITLSSGTTLYHMVKFHPGFSHYCYFTINLFLCISVAESCMLFVAALMSNQLLAVGTAAGVTVFMMMPSNLFRRLIDLPKFFWRYPMSYISYISWSIQGQFKNDLIGLEFKKRVLGDAKIKGEVALFLGA 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi217g00023 588 CDD ABCG_EPDR 17 246 - -
Sebi217g00023 588 Gene3D - 15 258 IPR027417 -
Sebi217g00023 588 SMART AAA_5 50 241 IPR003593 GO:0016887
Sebi217g00023 588 Pfam ABC-2 type transporter 221 277 IPR043926 GO:0140359
Sebi217g00023 588 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 20 264 IPR003439 GO:0005524
Sebi217g00023 588 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 260 IPR027417 -
Sebi217g00023 588 Pfam ABC-2 type transporter 352 557 IPR013525 GO:0016020|GO:0140359
Sebi217g00023 588 Pfam ABC transporter 41 192 IPR003439 GO:0005524
Sebi217g00023 588 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 16 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi217g00023 Sebi-Chr217 552880 559031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi217g00023 31 233 Calmodulin-binding Proteins AT2G36910 26.941 1.45e-10 62.4