Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi216g00027 ATGTATGATTTTCTTGCCAGCCATGCAATCATATCAGACCAAGCAGCACATGATATCAACAAATTTTGTGATCTCTCATCAAGTGCTTCCAACCAGACTAGTGAGTGCAATGCAGCAGTTGATGAAATTGGGAAGGATATTGCCTTCATTGATGTCTACAACATCTATGCTCCACTCTGCAATAATCCCAACCTCACTACCCAGCCCAAGAAGAACTCTGTTGTTATTGATCCCTGTAGTGATAACTATGTATATGCATATCTTAACCGAGGTGATGTTCAAGAGGCCATCCATGCCAATGTCACCAAGCTCAAATATGACTGGGAGCCTTGTAGTGATATCATTTCAAAGTGGGAAGATAGTCCTTCAACAGTCATTCCCCTTTTACATGAATTCCTCAATAGTGGACTCAGGGTCTGGATTTTTAGTGGTGATATAGATGGAAGGGTGCCTGTTACTTCAACCAAGTATTCCATTAACAAGATGAAGCTTCCCATTCAAACTACCTGGCATCCATGGTTCATATATGGAGAGGTTGGAGGCTATACTCAAGTATACAAGGGAGGTCTAACTTTTGCCACAGTGAGAGAAGCAGGACATCAAGTGCCAAGCTACCAGCCAGCAAGAGCCCTTTCTCTAATCAAACATTTCTTAGATGGCACTCCTCTTCCCAATACTAAAAGATATGACTAA 693 0.4185 MYDFLASHAIISDQAAHDINKFCDLSSSASNQTSECNAAVDEIGKDIAFIDVYNIYAPLCNNPNLTTQPKKNSVVIDPCSDNYVYAYLNRGDVQEAIHANVTKLKYDWEPCSDIISKWEDSPSTVIPLLHEFLNSGLRVWIFSGDIDGRVPVTSTKYSINKMKLPIQTTWHPWFIYGEVGGYTQVYKGGLTFATVREAGHQVPSYQPARALSLIKHFLDGTPLPNTKRYD 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi216g00027 230 Gene3D alpha/beta hydrolase 1 71 IPR029058 -
Sebi216g00027 230 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 2 207 IPR001563 GO:0004185|GO:0006508
Sebi216g00027 230 FunFam Carboxypeptidase 125 220 - -
Sebi216g00027 230 Pfam Serine carboxypeptidase 2 220 IPR001563 GO:0004185|GO:0006508
Sebi216g00027 230 SUPERFAMILY alpha/beta-Hydrolases 2 224 IPR029058 -
Sebi216g00027 230 Gene3D - 79 115 - -
Sebi216g00027 230 Gene3D - 125 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi216g00027 Sebi-Chr216 910946 912488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi216g00027 87 223 Calmodulin-binding Proteins AT2G22960 30.657 8.70e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi216g00027 K16297 - qsa:O6P43_029594 374.4