Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi215g00035 ATGACTGAGCCACAAGTTAGTAGTGATCATCATGGCACTTCTAGTTCTGGAGCTAAGCGTAAAGGCATGGGTGCAGCACTATTTGCAGCTGTGCACAAAGTGTTTGGTGCAAGCAATGTGTCAAAGCTTTTGTTGCATATTCCGGTCAATCGCCGCCATGAAGCGGTGATTACTATATCACATGAGGCTCAAGCAAGGTTGTCTGATCCGGTTTATGGTTGTGTGTCCACCATTCTTGCTTTGCAACAACAGGTGGCATCTTTGCAAGGGGAGCTTGATATGGTGCAAACTCAACTGGTAAATAGTAGGTTTGCATATGCAAATATTTTTCAGCAACAACAACAACCAAACATCAATGTAGCTTTACAACCATCGTACTCCAACAATTCCATATCTGCTTCCACCAACTTTATGAACATGAGTTGCTACTTGAACCCTATAGGTTTTGACCACCATGCTATGGACACAACACCCTCATCACATAGTTTCGAGCCTCTTCAACTCTCTCTCTTATCCCAAGATGAAGACGATGAGGAAGAAAGCAAGATCCCCCAAACTTTCAACCATGAGATAAGGAAGGACAAAGAAGGATCAGACACTTCAGTAGGGCAACCAAGCACTCATCTTTCTGCTACAAACTTCTCTCCACCAAAGAGGGATAATCAAGGATCACCAATAATGGAAAACAATGGAGATGGTGACAGGAGGACATTGGAGGATTACTCACTTCCTCGCCCAAGAGGAAACACTGCATCTATTGTGAGACCTCCAATCCAAGCCAATTCTTCTACAACTAGTGCAACAATATCTATTCATGGGGCTTTCTTCTGA 831 0.4344 MTEPQVSSDHHGTSSSGAKRKGMGAALFAAVHKVFGASNVSKLLLHIPVNRRHEAVITISHEAQARLSDPVYGCVSTILALQQQVASLQGELDMVQTQLVNSRFAYANIFQQQQQPNINVALQPSYSNNSISASTNFMNMSCYLNPIGFDHHAMDTTPSSHSFEPLQLSLLSQDEDDEEESKIPQTFNHEIRKDKEGSDTSVGQPSTHLSATNFSPPKRDNQGSPIMENNGDGDRRTLEDYSLPRPRGNTASIVRPPIQANSSTTSATISIHGAFF 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi215g00035 276 MobiDBLite consensus disorder prediction 172 255 - -
Sebi215g00035 276 Pfam Lateral organ boundaries (LOB) domain 25 96 IPR004883 -
Sebi215g00035 276 Coils Coil 78 98 - -
Sebi215g00035 276 MobiDBLite consensus disorder prediction 200 228 - -
Sebi215g00035 276 MobiDBLite consensus disorder prediction 182 199 - -
Sebi215g00035 276 PANTHER LOB DOMAIN CONTAINING PROTEIN 23 183 - -
Sebi215g00035 276 ProSiteProfiles LOB domain profile. 1 99 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi215g00035 Sebi-Chr215 842427 845831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi215g00035 24 181 AS2 family AT3G03760 58.140 9.72e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sebi215g00035 LOB 1.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi215g00035 - - ahf:112698228 212.616