Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi215g00031 ATGCTATGCCACCAAGTTGAAGTGAGAGCAGAGCCTCACCACTCTCTGAAAGTGAAAGCTTACGTTACTAAACTATCAGCCAAAGCTACCTTTAGCAAAATTTCCACTCAAAATTATGAAAAAATAAAAAAGTACAAAACTTGCTCCTTCAACCAAATCTGCTGGACTACTTCTAATGCTGAGGTTAAAGAGCAGCTTCAATCCTCCAACTCTCAGACCCTTCTAAGAATTCAACAGCTATTGAACTTTCCTGCTGCTTTAAGCAAATGGAGTAACAACACAGACTTTTGCAGCACAGATTCAAACTCTTCTCTTAATGTAGTATGCTATGAGGACACCATAACCCAATTGCACATAATAGGTGAAAGAAGTGCTCCACTTAGAAATTTCTCAATAGATTCCTTTGTCACAACACTGGTAAAGCTTCCCAGTTTGAAAGTCCTCACATTGGTTTCTCTTGGTATATGGGGTCCATTGCCTGTGCCTGATTTGAGCCGTTTGACAAATCTTCAAGTGCTGGAATTAGATGATAATGCTTTTGGACCTGAGTTTCCTCATCTTGGTAACAAGTTGGTTGCTCTTGTGCTAAGAGGTAATAGGTTCAGGTCTGGTATTCCTGCTGAAGTAAGCTCATATTTTCAGCTTCAGAGATTGGATATCTCATCAAATTCATTTGTGGGGCCTTTCCAGCCAGCATTGTTGTCACTACCTTCTATTACATATCTGAACATTTCTGGGAACAAATTAACTGGGATGCTTTTTGAGAATCTGTCTTGCAATTATGAGCTTGAAGTAGTTGATTTATCCTCAAATCTTTTGACTGGGAGCTTACCTAGATGTTTGCTGTCAAATTCCAGTGATAGGACTTTCCTGTATGCTAGAAATTGTCTAGAGAAAACGAATCAAAATCAGAACCCACCACCCTTTTGCCACACTGAAGCCTTAGCTGTGGGAATATTACCTGAAGGAAAGAAGCACAAACAAGTATCAAAGGTAGTTCTTTCCCTTGGCATAGTAGGTGGGACTCTTGGAGGAGTAGCACTTTGTTTGCTGATTTTCTTTATTGTTGGAAGAGGAAATGCCAAAAGCAAAATGAAGAATCCTCCAACAAGATTAATATCAGAGAATGCAGCTTCTGCATACACCTCTAAGTTGCTTTCTGATGCAAGGTATATATCTCAAACAAAGAAGTTGGGAGCAGTTGGCCTGCCAACTTATCGAAGTTTCTCATTAGAAGAAATTGAGATAGCTACAAACAACTTTGATACAGCTTCTTTAATGGGCGAGGATTCTTATGGGCAGATGTGCAGAGGTCAGCTGAAGAATGGGACACTTGTTGCCATTAGATGTATCAAAATGAAAAAAAGATACAGCACTCAAAACTTTATGCCTCACATAGAGCTGATATCAAAACTTAGGCATCGTCATTTAGCCAGCGCTCTTGGACACTGCTTTGAATGTTCTTTAGATGATTCAAGTGTCAGCAAAATATTTCTTGTCTTCGAATATGTACCGAATGGCACACTCAGGAGCTGGATCTCTGATGAACATACTAGAAAAACCTTGAGTTGGACTCAACGTATAGGAGCTGCAATTGGTGTAGCAAAGGGAATCCAATTTTTGCATACAGGAATTGTCCCTGGTGTATATTCCAACAATCTCAAAATAGAAGATGTTTTATTGGATCAGAATCTTGTTGCAAAAATCAGCAGTTATAACCTGCCTCTCTTATCTAACATTGGAAAGGTTCGGCATGGAAATTCTTCCAATGGATTAAAAAATTCTACCGGAAATAAAAGTGCAAAGGAAGAAGATAAGTCTGACATATACGATTTTGGAGTAATACTATTGGAACTCATTCTAGGAAGGACAATAAAGACAACAAATGATGCAGATGCTTTTAAGGATCTGTTGCAAGCAAGCATAGGAGCTGATGATGAGGCTAAGAGGAGCATTGTTGATCCAGCAATTCGCAAGGCATGCTTGGATCAATCATTGAAGACAATGATAGAGATTTGTGAGTTTGCTGCTCAAGTTCAAGATGCTTGGAGAGGAGATTCTCAAAGTAGTGAGGGATCACCAGGCTCACCTTTAGAGTCTCGAAGATTGCCCTTCCATTAG 2121 0.3951 MLCHQVEVRAEPHHSLKVKAYVTKLSAKATFSKISTQNYEKIKKYKTCSFNQICWTTSNAEVKEQLQSSNSQTLLRIQQLLNFPAALSKWSNNTDFCSTDSNSSLNVVCYEDTITQLHIIGERSAPLRNFSIDSFVTTLVKLPSLKVLTLVSLGIWGPLPVPDLSRLTNLQVLELDDNAFGPEFPHLGNKLVALVLRGNRFRSGIPAEVSSYFQLQRLDISSNSFVGPFQPALLSLPSITYLNISGNKLTGMLFENLSCNYELEVVDLSSNLLTGSLPRCLLSNSSDRTFLYARNCLEKTNQNQNPPPFCHTEALAVGILPEGKKHKQVSKVVLSLGIVGGTLGGVALCLLIFFIVGRGNAKSKMKNPPTRLISENAASAYTSKLLSDARYISQTKKLGAVGLPTYRSFSLEEIEIATNNFDTASLMGEDSYGQMCRGQLKNGTLVAIRCIKMKKRYSTQNFMPHIELISKLRHRHLASALGHCFECSLDDSSVSKIFLVFEYVPNGTLRSWISDEHTRKTLSWTQRIGAAIGVAKGIQFLHTGIVPGVYSNNLKIEDVLLDQNLVAKISSYNLPLLSNIGKVRHGNSSNGLKNSTGNKSAKEEDKSDIYDFGVILLELILGRTIKTTNDADAFKDLLQASIGADDEAKRSIVDPAIRKACLDQSLKTMIEICEFAAQVQDAWRGDSQSSEGSPGSPLESRRLPFH 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi215g00031 706 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase isoform A 188 306 - -
Sebi215g00031 706 SUPERFAMILY Protein kinase-like (PK-like) 403 631 IPR011009 -
Sebi215g00031 706 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 89 286 - -
Sebi215g00031 706 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 394 503 - -
Sebi215g00031 706 Gene3D Ribonuclease Inhibitor 67 321 IPR032675 -
Sebi215g00031 706 MobiDBLite consensus disorder prediction 684 706 - -
Sebi215g00031 706 ProSiteProfiles Protein kinase domain profile. 421 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi215g00031 706 Gene3D Phosphorylase Kinase; domain 1 392 503 - -
Sebi215g00031 706 SUPERFAMILY RNI-like 130 285 - -
Sebi215g00031 706 Pfam Protein tyrosine and serine/threonine kinase 425 623 IPR001245 GO:0004672|GO:0006468
Sebi215g00031 706 Gene3D Transferase(Phosphotransferase) domain 1 504 688 - -
Sebi215g00031 706 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 504 674 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi215g00031 Sebi-Chr215 764703 770580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi215g00031 83 704 Miscellaneous Gene Families AT3G03770 50.336 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Sebi215g00031 PK_Tyr_Ser-Thr 4.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi215g00031 - - gmx:100807539 926.391