Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi215g00021 ATGGATACCCATAGTTTTCAAAGCAGTGAAAACTTGGGCGGTTTGAAGCTGTTTTCGATCCTCAACAGTTTAAGTCATGATTTATCGGATGGCTATGTGATTCTAATCGATCCTAAAGGTAATTGCTTTCATCTCACCCTTGATGCCGGTAGCAATCGTGCACAGTACATTACTGGGGTTGGGAAGATGTTCCAGTTCTATGGAATATTTCAGCCACACAAAATTGAATTGACTTATAAAGGTTATGGAGTGTTTGATTACAAAATTTTTAATTATCTGATGTTAGAATTAGAGTATCCTGATTTATTGAGGAGGTCGGTTATTGTTTTGGACTCTTATTCTGATGAGGAATCAGAGTCCAATGGTTGGAAAGTTATATTGACAAAGGCAGTTGCTCTTACGAAGAACCCTTTGAAGGTTTGCAGAATTAAAGTTAGAGTCATTCGGCAATGGAGATCTGCTAATTTTAAAGATTCTTCCCATAAACCTATGATTAAAATGGTTGTTTTGGATGAAGAGGGAGGTTGTATCCAGTGCACTGTAAAGAGCATTCATGTCTATTTGTTTGAGGGTATTGTCCTGGAAGGCAATATTTATATGTTAGAAAATGTTTCTGTTGCACTTAATAGTGCAAAGTTCAAACCAACAATTCATGAATTCAGACTATTTTTCAAAAGAGAAACACAAGTTCGTATGATTGAGGATTCGAACATTCCAATGAATGGATTTTCTTTTGTCCCATTTACTGATATTCTGAACGAAAAGAATGATGAAAGTCGCTTGGTTGATATTATTGGAGTTGTTACCGGAAAAGGTAATACACAAACTGTTGAGTGTAGTCAACTACTTGATGCAAATAATGTGTCTGTTGAAGAGGAATTTCTACACAGATGTGTTTATAAATCAATAGTTGATCTTAAAGAAGTGACTCAAGGAGGCAATAAAAATGGACATCCTGAAGAGATTGATGCTTTCCTTGAAAAGAAATTTCTTTTTAAAGTGCAAGTTAAAATGCAAGACTTTGAATCAATTGTTCCTTCTGTTATCAGTGTTTCTAAACTGTGCTTCGATGAAAACATTATTCATGCTTTCATTCAGAAATACAAAGTTGATGAGTTTTGTTTCCCCCAAGATGACTCAGAACTATTGAGTCAATTTACTGAACATTCTGATTTAATGAAGGAAACTTTTACTGCTTCATGTGATAATGTGGATGATTCTGGAAGTCCAGTCTTAACCCCAGTTGGAAATAAAAATGAGAATGCCATCGTAGCTTTAAGTCCTTCTATTGATACACCGCTTGCTACTTCTGTGCCAAAGCCATCATTCATGACTCCATCAAAGGACGACATTAATAACTGGTGTGCAAAGCCAACAATGGCAGTTGGGGATGATGTAGAAATGCTTGCTACTAAGCTAAGGAAGGTCGTCAAGGAGGAGAAGAAGTAG 1449 0.3616 MDTHSFQSSENLGGLKLFSILNSLSHDLSDGYVILIDPKGNCFHLTLDAGSNRAQYITGVGKMFQFYGIFQPHKIELTYKGYGVFDYKIFNYLMLELEYPDLLRRSVIVLDSYSDEESESNGWKVILTKAVALTKNPLKVCRIKVRVIRQWRSANFKDSSHKPMIKMVVLDEEGGCIQCTVKSIHVYLFEGIVLEGNIYMLENVSVALNSAKFKPTIHEFRLFFKRETQVRMIEDSNIPMNGFSFVPFTDILNEKNDESRLVDIIGVVTGKGNTQTVECSQLLDANNVSVEEEFLHRCVYKSIVDLKEVTQGGNKNGHPEEIDAFLEKKFLFKVQVKMQDFESIVPSVISVSKLCFDENIIHAFIQKYKVDEFCFPQDDSELLSQFTEHSDLMKETFTASCDNVDDSGSPVLTPVGNKNENAIVALSPSIDTPLATSVPKPSFMTPSKDDINNWCAKPTMAVGDDVEMLATKLRKVVKEEKK 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi215g00021 482 Gene3D - 132 236 IPR012340 -
Sebi215g00021 482 Gene3D - 237 372 IPR012340 -
Sebi215g00021 482 Pfam Domain of unknown function DUF223 167 259 IPR003871 -
Sebi215g00021 482 SUPERFAMILY Nucleic acid-binding proteins 139 235 IPR012340 -
Sebi215g00021 482 CDD RPA1_DBD_A_like 142 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi215g00021 Sebi-Chr215 434257 438882 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi215g00021 169 269 Core DNA Replication Machinery Family AT2G06510 32.039 1.12e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi215g00021 - - adu:110281796 172.555