Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi215g00020 ATGGGTGATCTATTGGACATGCTAATTGAAGTAAATGACCCCATTGAGGGTTTTGAACATATAAATTTAAATGGGGCGGGTGCAGTTCATGGCAGTCCCGGTTTGGGTGAAGAAGAAAGCGATGGATCTAACCCAAGTCTTGAAGACAACAATGGAGGTTACATGGTGGATAAAGGAGGTTGTGTTGCACTGTTGGTTGATGCTGACTGTGAAGAAACATTGAATGATAATGGGGCAGGGGATGAACAAGGTGAAGAGAGCCGAATTAATATAAATAGTTTTCAGGATATGCGAGACATGAACCTCATTGAATTTAGTCCACATGAGATCATAAGATATGACTTTGCAACTTTGGATGTAGCATTTGAGTTCTATCGTTGGTATGCTCGTATGAATGGTTTTTGTGCTCGTAGAGGAAAGGTTATCAGTAGCAAAAAAATAGGGAGGGTATTACAACAAAATTTCTTTTGTTATAGAGAAGGCAAACGCGACCCAAATGGTTTAGAGGACGAAGACCGGCAGCGGCAACAAAAAGCAGTAACTAGATGCAATTGTAAAGCAGAATTCAGGGCACATGTTGATATTAACACAGGGAGGTGGAAGATGACTGTTGGTGATGTGAATCAGATAAATAATATGTTAAAGGTTGGTATTGGCGCGCCACGGATATTTGGGTCATTTGCCAACCAGTCTGGTGGTTATGAAAAGGCTGGTTTTCAGAAGAAAGACATTTATAACCAAATCGGCCAACAACGATGGTTGCAACATTCAGATGCAACAACAACAGTGAAATACTTGCGTGAGCTAGGTGTGAATGACCCAGCTATGTTTACTCGTCACACAACCAATGAGGAAGGGAGGACGACATCTAGGTGCGAAGGTTTGCACTCGGAGCTTGTTAAGTTTGTGCACTCGCAGTATAATCTTATTGATTTTCTACAACATTTCTATCAGTGTGTGGCCCATATGCGGTTCAAAGAACTTGAAGATGATTTTGCTTCTGTACATGGTGATCCAGTGTTGGAAACAAGTCTACAGAGTTTAGAGGGGTCAACTGCGAAACTTCTGACAAGACAAGTATTCCACCTATTTCGGCCGATTATTGAAAAAGCAAGTGTGTTGGAAAATCTTAAAATGAAGGAGCTTCCTCAGTCAGTGGTTTTAAAGAGGTGGACAAAAGGAGCGAAGGACAATATGACCTCAAACAGAAGCAACTCGTTAAATTTGTGGGATGCTCAGAAGATATTTAGATGTGGAGCCTTGAATGATTTGTATAGAGAGTTGGCCGACCTTCAGTCTGACACTATTGAAGAGTATAATGAAGCTAGGGAGAAGGCAAGTTTACTAATCAGAGCCATAGAGGCGAGAAAGGCCAGAGAAAGGGCTCAAAATTGTGAATCTAGGCAGCATGAGCCTCAAACTTTGAGAGATCCTATTCGTGTTAGACACAAAGGAAGGGGTAGTGGAAGCACTTCGGCTGTAGGCTTGAGAGTAAAGCGAACAACCAAGTGTACGTATTGTAGAGTTGTTGGACATAATAGGCTAACGTGTCCTCTTCGTGCCCAAGCAGCAGACATGTCATAG 1584 0.4205 MGDLLDMLIEVNDPIEGFEHINLNGAGAVHGSPGLGEEESDGSNPSLEDNNGGYMVDKGGCVALLVDADCEETLNDNGAGDEQGEESRININSFQDMRDMNLIEFSPHEIIRYDFATLDVAFEFYRWYARMNGFCARRGKVISSKKIGRVLQQNFFCYREGKRDPNGLEDEDRQRQQKAVTRCNCKAEFRAHVDINTGRWKMTVGDVNQINNMLKVGIGAPRIFGSFANQSGGYEKAGFQKKDIYNQIGQQRWLQHSDATTTVKYLRELGVNDPAMFTRHTTNEEGRTTSRCEGLHSELVKFVHSQYNLIDFLQHFYQCVAHMRFKELEDDFASVHGDPVLETSLQSLEGSTAKLLTRQVFHLFRPIIEKASVLENLKMKELPQSVVLKRWTKGAKDNMTSNRSNSLNLWDAQKIFRCGALNDLYRELADLQSDTIEEYNEAREKASLLIRAIEARKARERAQNCESRQHEPQTLRDPIRVRHKGRGSGSTSAVGLRVKRTTKCTYCRVVGHNRLTCPLRAQAADMS 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi215g00020 527 Coils Coil 436 456 - -
Sebi215g00020 527 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 287 444 IPR031052 GO:0006355
Sebi215g00020 527 MobiDBLite consensus disorder prediction 29 50 - -
Sebi215g00020 527 MobiDBLite consensus disorder prediction 461 484 - -
Sebi215g00020 527 MobiDBLite consensus disorder prediction 461 494 - -
Sebi215g00020 527 Pfam FAR1 DNA-binding domain 123 203 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi215g00020 Sebi-Chr215 430521 433017 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi215g00020 FAR1 5.4e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi215g00020 - - tpra:123913749 208.379