Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi214g00061 ATGCATCCCTCATTGCCAGTGACACACCCTAAAGCTTTCACTTTCGTGTCACCATCTCCTTTCCCAGCCTTTTTCTTTCGCCAGGAAGGAGGCGGTGAGGGTGGGAGGGGAGACGTTGACGGTGGGGGAGGTGGCAGCGGTGGCAGAGAGGCGGGTGGCGGTGGAACTGAACGAGGCGGCGAGGGTGAGAGTGAAGGCAAGCAGTTTTTGAATGCTGGAATTTTTGGGAATGAGGCAGAAGCATGCCATACTTTGCCACGCACTGCAACAAGAGCTGCAATGCTGCCTCAGGGGGACTTGGTTCCATTTTCATACATTGCTGGACTCCTGACAGGGAAGCCAAATTCAAAGGCCATTGGACCCAATGGTGACTCCCTAAGTGCTGCAGAAGCTTTCCATGTAGCTGGTATTAGTGGGGGCTGCTTTAAGTTGCAACCCAAGGAGGGTCTTGCACTTGTTAATGGAACTGGGGTCATGCAAGGAAAGCCAGAGTTTACAGACCATTTGACTCACAAATTGAAACACCATCCTGGTCAGATTGAGGCTGCAGCAGTTATGAACATATCTTGCATGGAAGTGCTTATGTTAAAGCAGCACAAAAGTCCTCAAATTGAAGTTATTCGGTCATCAACAAAATCAATTGAAAGGGAGATCAATTCTGTGAATGATAACCCTTTGATTGATGTATCAAGGAACAAAGCTTTACATGGTGGCAATTTTCAGGGCACCCCAGTAGGGGTTTCTATGGACAACACAAGATTAGCTTTGGCTGCCATTGGAAAACTCCTGTTTGCTCAAATGTCTGAGTTGGGTGGTGAGATAGCAATGGCTGCATATTGTTCTGAGCTTCAGTATCTAGCAAACCCTGTTACTAATCACGTGCAAAGTGCAGAACAACACAATCAAGATGTGAATTCTCTGGGTCTAATCTCTGCAAGGAAAACAGCTGAAGCTGTTGAAATATTAAAGCTCATGTCTTCAACTTATCTGATTGCTCTTTGTCAAGCAATAGATTTGAGGCATTTGGAGGAGAATCTAAAGAACACAGTTAAGAATACGGTGAGCCAAGTAGCTAGAAAAGGTCCTGACTGTGGGTGTCAATGGGGAGGTTATCCTTCCAAGTCCCTGTGA 1131 0.4651 MHPSLPVTHPKAFTFVSPSPFPAFFFRQEGGGEGGRGDVDGGGGGSGGREAGGGGTERGGEGESEGKQFLNAGIFGNEAEACHTLPRTATRAAMLPQGDLVPFSYIAGLLTGKPNSKAIGPNGDSLSAAEAFHVAGISGGCFKLQPKEGLALVNGTGVMQGKPEFTDHLTHKLKHHPGQIEAAAVMNISCMEVLMLKQHKSPQIEVIRSSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPVGVSMDNTRLALAAIGKLLFAQMSELGGEIAMAAYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVEILKLMSSTYLIALCQAIDLRHLEENLKNTVKNTVSQVARKGPDCGCQWGGYPSKSL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi214g00061 376 Gene3D - 95 154 IPR024083 -
Sebi214g00061 376 Gene3D Fumarase/aspartase (Central domain) 199 270 - -
Sebi214g00061 376 Gene3D Fumarase/aspartase (Central domain) 271 342 - -
Sebi214g00061 376 Gene3D Fumarase/aspartase (Central domain) 157 189 - -
Sebi214g00061 376 PANTHER HISTIDINE AMMONIA-LYASE 98 159 IPR001106 -
Sebi214g00061 376 SUPERFAMILY L-aspartase-like 68 361 IPR008948 GO:0003824
Sebi214g00061 376 Gene3D - 343 360 IPR023144 -
Sebi214g00061 376 Pfam Aromatic amino acid lyase 273 352 IPR001106 -
Sebi214g00061 376 Pfam Aromatic amino acid lyase 98 161 IPR001106 -
Sebi214g00061 376 Pfam Aromatic amino acid lyase 158 270 IPR001106 -
Sebi214g00061 376 MobiDBLite consensus disorder prediction 26 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi214g00061 Sebi-Chr214 1251145 1253567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi214g00061 56 374 Monolignol Biosynthesis Gene Families AT3G53260 55.125 3.07e-147 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi214g00061 K10775 - pvy:116143896 432.18