Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi214g00055 | ATGGGGTTTAGTAATCCAAGATCTGAAAGGTTTGAAGATGATCCTGAAGTAGCAAACAATGGTGACAATGGGAAGGGGATTAAGCTTAAATACAACATTGATGGAACACAAATACCTGAGCCTAGTCGCAAAACGGTTCAAAAGAAGGTGACAGGGAAGAAAGGGAAGTTCTTGAAAGTGGTTCAAGATGAAGTGTGCATTGATATTGGAATAACACTTGAAGTGACCCTCACAATTATCAGATCAGTGGTGGATGTCTTTTACATGATTCAGATTTTGATCAAGTTTCGTACAGCTTATGTTGCTCCTTCTTCCCAGGTATTTGGGAGAGGAGAGCTTGTTTTAGGGTATTCTAAGATTGCAGTTAGGTACCTTCGCAAGGGTTTCTGGTTAGACTTTATTGCAGCTTTGCCTCTTCCTCAGGTGTTGATTTGGATTGTTATCCCAACTCTTAGGGGTTCAACCATGGCAAACACTAAAAATGTCCTTAGGTTTTTCATCATCTTCCAATATCTTCCGAGGTTGTTTTTGATTTTTCCACTTTCATCACAAATTGTAAAAGCTACAGGAGTTGTGACAGAAACAGCATGGGCAGGGGCTGCTTACAACCTTATGCTTTACATGTTGGCAAGCCATATTTTAGGAGCTTGCTGGTATCTTCTATCAATAGAACGTCAAGAAGCATGTTGGAGAAGTGTGTGTGATTTGGAGAAGTCATCTTGTCAATATGGATTCTTTGACTGCCACAGGGTTGATGATACTCTTAGGGTGTCTTGGTTTATAGCTAGTAATATCACAAATTTATGCTCACCAGATGCTGACTTTTATCAGTTTGGTATATATGCTGATGCTATGACTTCTGAAGTTACATCCTCGGCATTCTTTAATAAGTACTTCTATTGTCTCTGGTGGGGCCTAAGGAATTTGAGTTCTTTGGGACAAGGCCTTCTTACTAGCACTTTTGTTGGAGAAATAATGGTAGCCATTGTTGTTGCAACCCTTGGATTAGTTCTTTTTGCGTTGCTGATTGGTAATATGCAGACATACCTCCAATCAATAACAGTTCGGCTAGAAGAGTGGAGGGTGAAAAGAACTGATACAGAACAATGGATGCATCACAGGCAACTACCTCCAGAGCTAAGAGAATCTGTGCGTAAATATGATCAATATAAATGGGTGGCTACACGAGGTGTAGATGAAGAAACTATTCTCAAAGGACTTCCATTGGATCTCAGGAGAGACATCAAGCGCCACCTTTGTCTTGAACTAGTTCGAGGAAGGATGCTAGATGCAATATGTGAAAGGCTAAAGCCTGCATTATGCACCGAAGGGACCTATCTTGTTCGTGAGGGTGATCCTGTGAATGAGATGCTCTTCATAATTAGAGGCCATCTTGATTCTTACACCACAAATGGAGGCCGTGCTGGATTCTTCAACTCATGCCGTATTGGGCCAGGTGATTTCTGTGGTGAAGAGCTATTAACATGGGCCTTAGACCCAAGACCAAGTGTGATACTCCCATCTTCCACTAGAACAGTTAAAGCCATATCAGAAGTAGAGGCCTTTGCACTCATAGCTGAAGACTTAAAATTTGTTGCATCTCAATTTAGAAGACTACACAGTAAACAACTGAGGCATAAATTCAGGTTTTATTCACACCAATGGAGAACATGGGCTGCTTGTTTCATTCAAGCTGCATGGAGACGGCACAAGAAAAGGAAAGAAGCTGCTGAATTAAGGGCCAGGGAGAATCTTGCAGCTTCTGAGCCTGAAACACCAACATCTGGTTCAGGCTTTGCTATGTATGCAAAACCAAAAAGGGTGGGGAGGAGCACTAGGAAAGGTGTCAATATGCATTCTGGGACAGACTCTGGGGTAGTTAGTTCTTTGCAGAAGCCAGCAGAACCAGACTTTGATGAATAA | 1923 | 0.4176 | MGFSNPRSERFEDDPEVANNGDNGKGIKLKYNIDGTQIPEPSRKTVQKKVTGKKGKFLKVVQDEVCIDIGITLEVTLTIIRSVVDVFYMIQILIKFRTAYVAPSSQVFGRGELVLGYSKIAVRYLRKGFWLDFIAALPLPQVLIWIVIPTLRGSTMANTKNVLRFFIIFQYLPRLFLIFPLSSQIVKATGVVTETAWAGAAYNLMLYMLASHILGACWYLLSIERQEACWRSVCDLEKSSCQYGFFDCHRVDDTLRVSWFIASNITNLCSPDADFYQFGIYADAMTSEVTSSAFFNKYFYCLWWGLRNLSSLGQGLLTSTFVGEIMVAIVVATLGLVLFALLIGNMQTYLQSITVRLEEWRVKRTDTEQWMHHRQLPPELRESVRKYDQYKWVATRGVDEETILKGLPLDLRRDIKRHLCLELVRGRMLDAICERLKPALCTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRAGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRHKKRKEAAELRARENLAASEPETPTSGSGFAMYAKPKRVGRSTRKGVNMHSGTDSGVVSSLQKPAEPDFDE | 640 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi214g00055 | 640 | ProSiteProfiles | IQ motif profile. | 556 | 584 | IPR000048 | GO:0005515 | |
Sebi214g00055 | 640 | CDD | CAP_ED | 429 | 551 | IPR000595 | - | |
Sebi214g00055 | 640 | Gene3D | - | 60 | 355 | - | - | |
Sebi214g00055 | 640 | MobiDBLite | consensus disorder prediction | 581 | 640 | - | - | |
Sebi214g00055 | 640 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 58 | 638 | - | - | |
Sebi214g00055 | 640 | MobiDBLite | consensus disorder prediction | 615 | 629 | - | - | |
Sebi214g00055 | 640 | FunFam | Cyclic nucleotide-gated ion channel 1 | 420 | 536 | - | - | |
Sebi214g00055 | 640 | SUPERFAMILY | Voltage-gated potassium channels | 70 | 351 | - | - | |
Sebi214g00055 | 640 | Pfam | Ion transport protein | 75 | 356 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Sebi214g00055 | 640 | SUPERFAMILY | cAMP-binding domain-like | 359 | 546 | IPR018490 | - | |
Sebi214g00055 | 640 | Gene3D | Jelly Rolls | 421 | 538 | IPR014710 | - | |
Sebi214g00055 | 640 | Gene3D | Helix hairpin bin | 357 | 420 | - | - | |
Sebi214g00055 | 640 | PRINTS | EAG/ELK/ERG potassium channel family signature | 342 | 351 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Sebi214g00055 | 640 | PRINTS | EAG/ELK/ERG potassium channel family signature | 298 | 315 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Sebi214g00055 | 640 | PRINTS | EAG/ELK/ERG potassium channel family signature | 92 | 101 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Sebi214g00055 | 640 | PRINTS | EAG/ELK/ERG potassium channel family signature | 209 | 219 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Sebi214g00055 | 640 | PRINTS | EAG/ELK/ERG potassium channel family signature | 81 | 91 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Sebi214g00055 | 640 | PRINTS | EAG/ELK/ERG potassium channel family signature | 392 | 399 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Sebi214g00055 | 640 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 427 | 517 | IPR000595 | - | |
Sebi214g00055 | 640 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Sebi214g00055 | 640 | SMART | cnmp_10 | 420 | 551 | IPR000595 | - | |
Sebi214g00055 | 640 | FunFam | Cyclic nucleotide-gated ion channel 1 | 356 | 420 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi214g00055 | Sebi-Chr214 | 1122008 | 1125587 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi214g00055 | 57 | 639 | Ion Channels | AT2G28260 | 73.818 | 0.0 | 900 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi214g00055 | K05391 | - | gmx:100786868 | 1022.31 |