Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi214g00015 ATGTCCGTCATCGACATTCTCTTCCGCGTCGACGCCATATGCCACAAATATGACAAATACGACATTGATAAACAACGCCAGGACAACGCCTATGGCGATGACGCCTTCGCTCGTCTCTACGCTGCAGTTGAATCCAGCATTCAAGAATCTCTCAATAAATCTGAGCTTGCTTCCACTGAGAAGAACAGGGCAGTTGCTGCGGCTTTGAATGCAGAGGTTCGTCGAACCAAAGGTAGATTGATGGACGAAGTTCCTAAACTGCGCAAACTGGTGAATAAGAAGGTTAAAGGTCTCACAAATGAAGATATAGCCATTCGTCATGATCTTGTTCTGGCATTGCCAGAAAGAATCCAAGCAATACCAGATGGTATTACTGGAGCATCTAATCATACTGGGGGATGGGCAGCTACCTCATCCAATCCTCAAATCAAGTTTGATTCATCAGGGGGAAATCTTGACAGTGAATATTTCCAGCAAAGTGAAGAATCCAGTCAGTTTAGACAAGAGTATGAAATGCGCAAGATGAAACAGGATGAAGGGCTTGATATCATATCAGAGGGATTGGATACCCTGAAGGATATGGCTCATGATATGAATGAGGAATTAGATCGGCAAGTTCCTTTAATGGATGAAATTGACACAAAGGTGGATAGGGCAACAGCTGATGTGAAAAACACTAACCTAAGGCTGAAGAAAACTCTCACCGAGCTGAGGTCTAGTCGAAATTTCTGCATTGACATCATTCTTCTGTGTGTTCTTCTGGGAATCCTTGCCTATTTATACAAAGCTAAGTAA 795 0.4314 MSVIDILFRVDAICHKYDKYDIDKQRQDNAYGDDAFARLYAAVESSIQESLNKSELASTEKNRAVAAALNAEVRRTKGRLMDEVPKLRKLVNKKVKGLTNEDIAIRHDLVLALPERIQAIPDGITGASNHTGGWAATSSNPQIKFDSSGGNLDSEYFQQSEESSQFRQEYEMRKMKQDEGLDIISEGLDTLKDMAHDMNEELDRQVPLMDEIDTKVDRATADVKNTNLRLKKTLTELRSSRNFCIDIILLCVLLGILAYLYKAK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi214g00015 264 CDD SNARE_Qc 176 232 - -
Sebi214g00015 264 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 171 233 IPR000727 -
Sebi214g00015 264 SUPERFAMILY SNARE fusion complex 164 232 - -
Sebi214g00015 264 Gene3D - 171 232 - -
Sebi214g00015 264 PANTHER SYNTAXIN 45 252 IPR045242 -
Sebi214g00015 264 SMART tSNARE_6 166 233 IPR000727 -
Sebi214g00015 264 FunFam Putative syntaxin-71-like 171 232 - -
Sebi214g00015 264 Pfam SNARE domain 208 257 IPR000727 -
Sebi214g00015 264 ProSitePatterns Syntaxin / epimorphin family signature. 177 216 IPR006012 GO:0005484|GO:0006886|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi214g00015 Sebi-Chr214 277472 280113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi214g00015 1 261 SNARE and Associated Proteins AT3G09740 69.202 1.78e-136 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi214g00015 K08506 - gmx:100817729 437.958