Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi214g00010 ATGGAAATTGATCTGAATGATGCAGTGACTGAGGTTGAGAAGAATGCAACTTGCAATGGGGATTGTCACAAAGGTGCTTGTGTTTGCTGTTTGTCCTCTCCAACTTGTTCCTCTTCAGCTCGTGTCTCTTCTTCTTATCTTGAGCTCTGGCATGCTTGTGCTGGCCCTCTTACCAACCTTCCAAAGAAAGGGAATGTGGTGGTCTATTTTCCACAAGGACACTTAGAACAAGCTGCATCTTTCTCTCCCTTCTCTCCATTGGAGATGCCCACCTATGATCTTCAGCCACAGATCTTTTGCAGGGTTGTTAATGTCCAGCTACTTGCTAATAAGGAGAATGATGAGGTTTATACACAGGTTACTTTGCTTCCCCAGGCAGAGTTAGCAGGGATATATTTGGAGGGCAAAGAGATTGAGGGATTGGGAGATGATGAAGAGGGAAATGGAAAAACAGCTACAAAATCAACCCCTCACATGTTTTGCAAAACTCTTACTGCCTCTGATACTAGCACTCATGGGGGGTTCTCTGTTCCTCGTAGAGCTGCTGAAGACTGTTTTCCTCCTTTGGATTATAAGCAGCAGAGACCCTCTCAAGAGCTTGTTGCAAAAGACCTGCATGGTGTGGAGTGGAAATTTCGCCATATTTACAGAGGTCAACCAAGGCGGCATCTGCTTACTACTGGCTGGAGTATTTTTGTTAGCCAAAAGAATCTTGTTTCTGGTGATGCAGTGCTCTTTCTAAGGGGTGAAAATGGAGAATTGAGATTGGGAATCAGAAGAGCTGCTCGGCCAAGAAATGGTCTTCCTGAGTCAATTGTTGGTAACCAGAGTTGTTATCCCAATTTCCTTTCTTCTGTGGCTAATGCTATATCTGCGAAAAGCATGTTTCATGTTTTCTACAGCCCAAGAGCAAGTCATGCAGATTTTGTCATACCCTACCAAAAATTTGTCAAAAGCATCAAGAATCCAGTGACCATCGGGACAAGATTTAAAATGAAATTTGAGATGGATGAATCTCCAGAAAGAAGGTGTAGTGGTGGTATAGTGACTGGAATGAGTGATTTGGATCCCTATAAATGGCCTAAGTCAAAATGGAGGTGCTTGATGGTCAGATGGGATGAGGATATTGAGATCAATCATCAAGATAGAGTATCTCCATGGGAGATTGATCCTTCTGCTTCTCTCCCTCCCTTGAGCATTCAATCTTCCCGGAGGCTGAAGAAACTGCGGACAGGTCTGCAAGCTGAATCACCCAGTCACCTCATCACTGGGGTGGCAGCAGGAGGCAATGGGTTTATGGACTTTGAGGAGTCTGTAAGATCACCCAAGGTCTTGCAAGGTCAAGAAAATACAAGTTTTATGTCACTATATTATGGATGTGACACAGTAACTAAGCAGCCAGAATTTGATATCAGAACTCCAAGTCATCCTAATCTTGCATCAACTGGAGCAAGAAAGATTACTGCTGCTGAGCTTATGAGGGTTCACCCTTCTAGTTATGCAGGCTTCACGGAAACTAACAGGTTTCCAAGGGTCTTGCAAGGTCAAGAAATATGTCCATTGAGGTCCCTGACAGGAGGAAAGGTTGACTTGAACCTTAGTGCTTGGGGCAAACCCAATATCAGTTGCACAAATTACAACCTGCATCAGGCAACCAAGCCAAGCTTTCACTCTTTAGGACCAGAAGTTCTTCAAAGTGCCTATTTTCCCTATGGTGATATTCACAAAGCTGGTCAAGGTAGCAGCATGTTGTGCTCTAAACCCACCAATTTCCAACTAGAGAATGTGCCATTTAACACACCTTCCACTCAGTCAGGGATCATGAGAAGTGAAGTTGGACTGTCAGGTCTCACAATCCCAAATGAGCAGAAGCTGCAGGACAACATTTCTGGTGCTGCTTCTTTAGGGGCAAACATGAGGATTCCAAATGATGACAATTTCAAGGGAAAGGCTAATGCTTGTAAACTATTTGGATTTTCCTTGTCTGGTGAAACTACCACCCAAAATTTACAGAACTCTACTAAAAGAAGTTGCACAAAGGTTCACAAGCAAGGTAGCTTAGTTGGAAGAGCCATTGATCTCTCAAGACTGAGCAGCTACAGTGACCTGTTGAGTGAACTAGAGAGACTATTTTGCATGGAAGGCCTTCTAAGAGATCCTGATAAGGGATGGAGAATCCTTTACACTGACAGTGAAAATGACATTATGGTTGTGGGAGATGACCCATGGCATGAATTCTGCGATGTGGTAACAAAGATTCATATATATACACAAGAAGAAGTGGAGAAGATGACAATTGGGATTATCAATGATGATACCCAGAGCTGTTTGGAACAGGCACCACAGATTATGGAGGCTTCAAAGTCTTCCTCAGTGGGTCAGCCAGATTCTTCTCCCACAGTAGTTAGAATCTAG 2415 0.436 MEIDLNDAVTEVEKNATCNGDCHKGACVCCLSSPTCSSSARVSSSYLELWHACAGPLTNLPKKGNVVVYFPQGHLEQAASFSPFSPLEMPTYDLQPQIFCRVVNVQLLANKENDEVYTQVTLLPQAELAGIYLEGKEIEGLGDDEEGNGKTATKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIVGNQSCYPNFLSSVANAISAKSMFHVFYSPRASHADFVIPYQKFVKSIKNPVTIGTRFKMKFEMDESPERRCSGGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIEINHQDRVSPWEIDPSASLPPLSIQSSRRLKKLRTGLQAESPSHLITGVAAGGNGFMDFEESVRSPKVLQGQENTSFMSLYYGCDTVTKQPEFDIRTPSHPNLASTGARKITAAELMRVHPSSYAGFTETNRFPRVLQGQEICPLRSLTGGKVDLNLSAWGKPNISCTNYNLHQATKPSFHSLGPEVLQSAYFPYGDIHKAGQGSSMLCSKPTNFQLENVPFNTPSTQSGIMRSEVGLSGLTIPNEQKLQDNISGAASLGANMRIPNDDNFKGKANACKLFGFSLSGETTTQNLQNSTKRSCTKVHKQGSLVGRAIDLSRLSSYSDLLSELERLFCMEGLLRDPDKGWRILYTDSENDIMVVGDDPWHEFCDVVTKIHIYTQEEVEKMTIGIINDDTQSCLEQAPQIMEASKSSSVGQPDSSPTVVRI 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi214g00010 804 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 45 765 IPR044835 GO:0003677|GO:0006355|GO:0009725
Sebi214g00010 804 Pfam AUX/IAA family 668 760 IPR033389 -
Sebi214g00010 804 FunFam Auxin response factor 671 765 - -
Sebi214g00010 804 Pfam B3 DNA binding domain 160 261 IPR003340 GO:0003677
Sebi214g00010 804 SMART B3_2 160 262 IPR003340 GO:0003677
Sebi214g00010 804 CDD B3_DNA 158 260 IPR003340 GO:0003677
Sebi214g00010 804 SUPERFAMILY DNA-binding pseudobarrel domain 153 271 IPR015300 -
Sebi214g00010 804 MobiDBLite consensus disorder prediction 784 804 - -
Sebi214g00010 804 Pfam Auxin response factor 286 368 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Sebi214g00010 804 FunFam Auxin response factor 323 396 - -
Sebi214g00010 804 Gene3D - 158 262 IPR015300 -
Sebi214g00010 804 ProSiteProfiles PB1 domain profile. 676 758 IPR000270 GO:0005515
Sebi214g00010 804 Gene3D - 324 396 - -
Sebi214g00010 804 Gene3D - 672 765 - -
Sebi214g00010 804 FunFam Auxin response factor 158 262 - -
Sebi214g00010 804 ProSiteProfiles B3 DNA-binding domain profile. 160 262 IPR003340 GO:0003677
Sebi214g00010 804 SUPERFAMILY CAD & PB1 domains 678 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi214g00010 Sebi-Chr214 156903 162369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi214g00010 42 804 B3 DNA Binding Superfamily AT5G60450 60.858 0.0 872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Sebi214g00010 B3 1.4e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi214g00010 - - gmx:100812909 1414.44