Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi214g00002 ATGAGAACAAGATTGGCCAAGGGTATCCTCCCTAGCGGACAGAGGATAGCCGTGAAGAGATTGTCAGTAAACTCCTTGCAGGGTACAGTAGAGTTCAGGAATGAAGCTACCCTTATGACCAAGCTTCATCATAGAAATTTAGTGAGGCTATTGGGATTTTACTTGGAGGGGCAGGAGAAGATGCTTGTCTATGAATACATACCAAACAAAAGCCTTGATCACTTTCTATTTGATCCTGTAAAGCAAAGAGAGTTAGATTGGTCAAGACGCTACAAGATTATAGTTGGCATTACTCGAGGAATTCTTTATCTTCATGAAGATTCCCAGCTTACAATTATACATCGTGATCTCAAAGCTAGCAATGTTCTATTAGATGAAAATATGAACCCAAAGATTTCAGATTTTGGCATGGCAAAAATTTTCCAGGCAGATCAGACTCAAATAAATACAAGAAGGATAGTTGGGACTTATGGTTACATGTCTCCAGAATATGCAACGCGTGGACAGTACTCTGTGAAATCAGATGTATTCAGCTTTGGTGTCCTAGTTTTGGAGATTGTGAGTGGCAAGAAGAATGCTAATTTTCATCAATCGAATCATACTGGTGACCTCTTAAGCTATGCTTGGAAAAATTGGACAGAGCAAACACCTTTGGAATTGCTGGATCCAACACTTAGAGGTTCTTATTCAAGAAATGAAGTAATCAGATGCATCCACATAGGTTTATTGTGTGTTCAGGAAAATCCATCTTACAGGCCTTCTATGGCAACTATTGCACTTATGCTGAACAGTTATTCAGTTACCTTGTCATTACCACGACAGCCAGCATCTTTCCTGCATGGAAGAACACCTAACAGCCTAACAGGCTAA 870 0.3989 MRTRLAKGILPSGQRIAVKRLSVNSLQGTVEFRNEATLMTKLHHRNLVRLLGFYLEGQEKMLVYEYIPNKSLDHFLFDPVKQRELDWSRRYKIIVGITRGILYLHEDSQLTIIHRDLKASNVLLDENMNPKISDFGMAKIFQADQTQINTRRIVGTYGYMSPEYATRGQYSVKSDVFSFGVLVLEIVSGKKNANFHQSNHTGDLLSYAWKNWTEQTPLELLDPTLRGSYSRNEVIRCIHIGLLCVQENPSYRPSMATIALMLNSYSVTLSLPRQPASFLHGRTPNSLTG 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi214g00002 289 ProSitePatterns Serine/Threonine protein kinases active-site signature. 112 124 IPR008271 GO:0004672|GO:0006468
Sebi214g00002 289 SMART serkin_6 2 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi214g00002 289 ProSiteProfiles Protein kinase domain profile. 1 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi214g00002 289 PIRSF ILK 11 275 - -
Sebi214g00002 289 Pfam Protein tyrosine and serine/threonine kinase 14 259 IPR001245 GO:0004672|GO:0006468
Sebi214g00002 289 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 278 - -
Sebi214g00002 289 CDD STKc_IRAK 7 263 - -
Sebi214g00002 289 Gene3D Transferase(Phosphotransferase) domain 1 67 271 - -
Sebi214g00002 289 Gene3D Phosphorylase Kinase; domain 1 2 66 - -
Sebi214g00002 289 SUPERFAMILY Protein kinase-like (PK-like) 8 278 IPR011009 -
Sebi214g00002 289 FunFam cysteine-rich receptor-like protein kinase 10 67 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi214g00002 Sebi-Chr214 9263 10816 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi214g00002 7 286 Receptor kinase-like Gene Family AT4G05200 63.380 3.20e-133 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi214g00002 PK_Tyr_Ser-Thr 3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi214g00002 - - gmx:547727 493.812