Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi213g00101 ATGCACAACAGGGTTTGTCTCTTGCTGGCTTTTTGCATCTTGAATGCCCTTCCTGCATGGAGCGTGGATTCAGAGTCATTGATCTTGGGTTGTGGGTTGGGTGAAGGTGGTGGCAAAGATGCTGATGGAAGACAATGGAGCCCTGATAACAAATACCTCTCAGGAGGTAATTCCATCACATCCAAAGCCTCTTTCCAAGACCCTTCTCTTTTATCTGAGATTCCATACATGACAGCACGAGTTTTCACATCTGAGGCAACATACAAATTCCCTGTTCAATCTGATAAACGTTACTGGCTCAGGCTCCATTTTTATCCCTCTGTTTATGGCAGTTTCAACCCCTCTGATTCATATTTCTCTGTTAAAGCAAATGGGGTCACGCTCCTTGCCAATTTCAGCGCCTCAATTACATGTCAGGCCCTTTCACAGGCCTATCTTGATAGAGAGTATTCCCTTGCGCCTTTGAATTCAGATACTCTCACTGTTACCTTCAAGCCTTCTGATAAACACAATGGGGCTTTTGCTTTTGTCAATGGAATTCAGCTGATCCAAATGCCTGAGTTGTTTGATTCAGCTTCAATGGTGGGTTATGCTGACCAAACCGTGGATGCAAAAAGTTTGCATCTTCAGACAATGTTTAGATTAAACGTTGGTGGGCAATATATATCTCCGGTTCATGATTCTGGCCTAAATAGGATGTGGTATGATGATACTCCTTACCTGTTTGGTGCTGCCACTGGTGTTACTACACAAGCTGACAAGAAGGTTAAAATCAACTACGAGAGCATGCCTCAGTATATTGCTCCACCAGATGTCTATTCCACATCAAGATCCATGGGAACCAATAAGGATGTTAACATGGGGTATAATCTCACATGGATTTTCCAAGTTGATCCAAATTCCATGTACCTTACAAGGTTGCATTTTTGTGACTTCTACTTTTCAAAAGTCAATGAGATTGTTTTCAATATATATGTCAACAACCAAACGGCAGAGGCTCAAGCTGATGTGATTGGATGGACAGGAGGTAAAGCAGTGCCAACTTACAAGGATTATGTAGTATATGTCCAAGATGGGCCAGGTGATGAGCAGCTTTGGCTTGCATTGCACCCAGCACCTGATACAAAGCCTGAGTACTATGATGCCATACTCAATGGGGTTGAGATATTCAAGCTCAATGACACTGACCTATCTGGCCCCAATCCTCAACCTTCTGACATGCTGGTTGAGCATGAGGAGAAGGAAAGAACTTTCCAAGACAATAAACATCAAAAAAGGACTTTTGTTATTGGTGGAGCTGCTGGAGGTGCTGCAGGTTTTGCCTTAGTGGCTGCAATTTGTGTTGTTGTGCACCAAAAGAAAAGGAGATCTCCAGGATCATATTCCAATACATCAAGCTGGCTTCCCTTATATGGGAACTCAAACACAACCGGCACCAAATCCACAGGGTCAGGGAAAAGTGTTGGTAGTGCCAACTTAGCCATGGCTCAAGGACTATGCCGTTATTTCTCTTTACAAGAGATGAAGCAAGCAACCAAGAATTTTGATGAGGCCAATGTCATTGGTGTAGGAGGCTTTGGAAAGGTTTACAAGGGTGTTGTTGATAATGGGTTTAAAGTGGCAATCAAAAGATCAAACCCACAATCAGAACAAGGAGTCAATGAATTCCAAACTGAAATTGAGATGCTTTCTAAGCTTAGACACAAACATTTGGTCTCCTTGATTGGTTTTTGTGAAGAAGATGATGAAATGTGCCTTGTTTATGACTACATGGCTCTTGGCACTCTAAGAGAACATCTCTACAAGGGAAACAAACCACTGGATACTCTATCATGGAAGCAAAGACCAGCTTTAAATCCTAACCTTCCAAAGGAACAAGTAAGCCTTGCAGATTGGGCTCTTCTGTGCAAAAGAAAAGGGACACTGGAGGATATTATTGACCCCAATCTCAAAGGAAAGATAAACCCAGAAAGCTTGAAGAAGTTTGCAGATGCAGCTGAAAAGTGTTTGTCAGATCATGGACTTGATCGCCCTTCCATGAATGATCTATTATGGAATCTGGAGTTTGCTCTGAACCTGCAAGAAAACCCTGATGGTTCAAGCCATGCACCACGTGTTGAAGAAAGTGAGTTTGAAGAGGTAAGCTTGCAAGACAATGACATGGCAGCACATTATAGAAACCTGAAAATTGGAAGTGAGAATGAGATTAGCCAAGACTCAAGTGAAAATTCGGCTCCCATCTTCTCACAAATGGTCAATCCAAAAGGGCGATGA 2274 0.4257 MHNRVCLLLAFCILNALPAWSVDSESLILGCGLGEGGGKDADGRQWSPDNKYLSGGNSITSKASFQDPSLLSEIPYMTARVFTSEATYKFPVQSDKRYWLRLHFYPSVYGSFNPSDSYFSVKANGVTLLANFSASITCQALSQAYLDREYSLAPLNSDTLTVTFKPSDKHNGAFAFVNGIQLIQMPELFDSASMVGYADQTVDAKSLHLQTMFRLNVGGQYISPVHDSGLNRMWYDDTPYLFGAATGVTTQADKKVKINYESMPQYIAPPDVYSTSRSMGTNKDVNMGYNLTWIFQVDPNSMYLTRLHFCDFYFSKVNEIVFNIYVNNQTAEAQADVIGWTGGKAVPTYKDYVVYVQDGPGDEQLWLALHPAPDTKPEYYDAILNGVEIFKLNDTDLSGPNPQPSDMLVEHEEKERTFQDNKHQKRTFVIGGAAGGAAGFALVAAICVVVHQKKRRSPGSYSNTSSWLPLYGNSNTTGTKSTGSGKSVGSANLAMAQGLCRYFSLQEMKQATKNFDEANVIGVGGFGKVYKGVVDNGFKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDDEMCLVYDYMALGTLREHLYKGNKPLDTLSWKQRPALNPNLPKEQVSLADWALLCKRKGTLEDIIDPNLKGKINPESLKKFADAAEKCLSDHGLDRPSMNDLLWNLEFALNLQENPDGSSHAPRVEESEFEEVSLQDNDMAAHYRNLKIGSENEISQDSSENSAPIFSQMVNPKGR 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi213g00101 757 Pfam Protein tyrosine and serine/threonine kinase 519 606 IPR001245 GO:0004672|GO:0006468
Sebi213g00101 757 PANTHER OS03G0124300 PROTEIN-RELATED 6 462 IPR046957 GO:0004672
Sebi213g00101 757 ProSiteProfiles Protein kinase domain profile. 515 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi213g00101 757 ProSitePatterns Protein kinases ATP-binding region signature. 521 543 IPR017441 GO:0005524
Sebi213g00101 757 FunFam FERONIA receptor-like kinase 207 393 - -
Sebi213g00101 757 Gene3D - 30 186 - -
Sebi213g00101 757 Gene3D - 207 393 - -
Sebi213g00101 757 FunFam receptor-like protein kinase FERONIA 477 590 - -
Sebi213g00101 757 SUPERFAMILY Protein kinase-like (PK-like) 494 615 IPR011009 -
Sebi213g00101 757 MobiDBLite consensus disorder prediction 730 757 - -
Sebi213g00101 757 Pfam Malectin-like domain 30 391 IPR024788 -
Sebi213g00101 757 Gene3D Phosphorylase Kinase; domain 1 476 589 - -
Sebi213g00101 757 MobiDBLite consensus disorder prediction 731 750 - -
Sebi213g00101 757 FunFam FERONIA receptor-like kinase 26 186 - -
Sebi213g00101 757 Gene3D Transferase(Phosphotransferase) domain 1 590 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi213g00101 Sebi-Chr213 1453693 1456266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi213g00101 615 757 Receptor kinase-like Gene Family AT3G51550 44.785 5.17e-33 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi213g00101 Malectin_like 3.7e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi213g00101 - - gmx:100815737 999.193