Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi213g00094 ATGTCACCGATGCAATGGAATTATGAACTATCTGCTCAAAAGGAGACTCCTGTGAATATTATTGTGGGTTCTCATGTCTGGATTGAAGACCCAGAGGTATGTTGGATTGATGGACAAGTATCAAAAATCAATGGAAAGGATGCTGAAATTGAAACTACCAATGGAAAAAAGGTTGTTGCAAAGTTATCAAAAATATATCCCAAGGATATGGAAGCTCCTCCTGGTGGAGTGGATGATATGACGAAACTGTCCTATTTGCACGAGCCTGGAGTCCTGCAGAACTTAAAAGCTAGATATGAATTAAATGAAATATATACTTATACTGGAAATATTCTGATTGCAATAAATCCATTCCAAAGGCTACCTCACATTTATGGTGCACACATGATGCATCAATACAAAGGAGCACCATTTGGAGAATTAAGCCCTCATGTATTCGCAGTTGCTGATGTTGCATATAGGGCGATGGTTAATGAAACAAAAAGCAATTCAATTCTGGTCAGTGGGGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGCTTATGCAATACCTTGCTTTCTTAGGCGGTAGGGCTGCTACTGAAGGACGAACAGTTGAGCAACAAGTTCTTGAATCAAATCCAGTCCTGGAAGCATTTGGCAATGCTAAAACTGTCAGAAATAACAATTCTAGTCGTTTTGGTAAATTTGTTGAGATCCAATTTGATAAGAGTGGAAGAATCTCAGGAGCAGCCATCCGTACATACCTTTTAGAAAGATCTCGCGTTTGTCAAATTAATGATCCTGAACGGAACTACCACTGCTTTTATCTTCTTTGTGCTGCACCACAGGAGGAAATTGAGAAATATAAATTAGGAAACCCTAGATCGTTTCACTACCTTAACCAGTCAAAATGCTATGAATTGGCTGATATAAGTGATGCTCGTGAGTACCTTGCCACCCGGAGAGCTATGGATATTGTTGGAATAAGTCAAAAAGATCAGGAAGCCATTTTCAGAGTCGTTGCTTCTATTCTTCATCTTGGTAATATTGATTTTACCAAAGGAAAGGAAGTTGACTCATCAGTTCCTAAAGATGACAAGTCCAAATTCCACCTGAAAACAACTGCTGAGCTTCTCATGTGTGATGTGGATGCCTTAGAAGATGCATTATGTAAGCGTGTCATGATCACCCCTGAAGAAGTTATAAAACGGAGCCTTGACCCACAAAGTGCAGCAGTCAGTAGAGATGGATTGGCAAAAACAATTTATTCTCGGCTATTTGACTGGTTGGTGGACACGATTAATAATTCAATCGGACAAGATCCTAATTCTAAATCTTTGATTGGGGTCCTTGATATCTATGGTTTTGAAAGCTTTAAATCTAACAGTTTTGAGCAGTTTTGCATTAATTTCACAAATGAGAAGTTGCAGCAACATTTCAATCAGGCAAAGTCTCAGACTGAATTTTTCACTTCAAAATATACAAAGGAGCAGATTAATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTTTGGACCTTATTGAAAAGAAACCCGGAGGAATCGTTGCTCTTCTCGATGAAGCTTGCATGTTTCCAAAGTCAACTCACGAAACATTTGCAAACAAGCTTTATCAAACATTTAAGAATCACAAGCGCTTTATTAAGCCAAAATTGTCTAGAACGGATTTCACCATTGCTCATTATGCTGGGGAGGTGACATACCAGTCTGACCAATTTTTAGACAAAAACAAGGATTATGTAGTTCCTGAACATCAAGATTTGTTGGGTGCTTCCAAATGTTCTTTTGTAGCTGGCCTTTTCCCACCACCTCCAGAAGAGACATCAAAGTCTTCCAAATTTTCTTCAATTGGTTCTCGTTTTAAGCTACAACTACAACAACTAATGGAAACATTAAATTCTACAGAACCCCATTACATTAGATGCGTGAAACCAAACAACCTCCTTAAGCCTGCAGTTTTTGAGAATGTCAACATTATGCAGCAACTTCGTTGTGGGGGTGTTTTGGAGGCAATCAGAATCAGTTGTGCTGGCTACCCTACTCGCCGTCCTTTCTTTGAATTTGTCAACAGATTTGGCCTCCTTGCCCCAGAGGCCATGGAAGCAAACTGTGATGAAAAGACTGCTTGCCAAAAGATTCTGGAAAATATGGGGCTTAAAGGATACCAGATTGGAAAAACAAAGGTATTCTTGAGAGCAGGTCAGATGGCTGAACTGGATGCACGGAGAGCTCAAGTACTTAGCAATGCAGCAAAAGTTATCCAAGGGCGCATACGAACTCATCAAGCTCGTAAACATTATCGTGCACTGCGAAAGAAGACCATATATGTGCAGTCTCGGTGGAGAGGAAGACTTGCATGCAAAATCTATGAGAACATGCGAAGGGAGGCTGCTGCTGTGAAAATTCAAAAGAACATACGCAGATATGAAGCTAGGAAAGCCTATAAAGAACTTCATGTGTCAGTAATTACACTGCAAACAGCTTTAAGGGCCATGGCTGCTCGCAAGGTGTTCAGATTTAGGAAACAGACTAAAGCCTCAATCATTATTCAGGCTCGGTGGAGGTGTCACAAAGCTGCCTTATATTATAAGAGGCTCAAGAAAGGTATATTAGTTACACAATGCAGATGGAGGGGGCGTGTAGCCAGGAGGGAACTTAGGAAACTGAAAATGGCTGCAAGAGAAACTGGCGCACTTCAAGAAGCAAAGGATAAGCTTGAAAAACGAGTTGAGGAACTCACTTGGCGTCTTCAACTCGAAAAAGGTTTAAGGACCAATCTAGAAGAATCCAAAGCACAGGAGATAGCAAAACTGCAAAACTCCTTGCAGGAGATGCAGAGCAAAGTTGATGAAGCTAATGCTCTGCTCATCAAGGAGCGAGAAAGTGCAAAAAAAGTCATTGAAGAAGCACCTCCTGTTGTTAAAGAAACACAAGTTATTGTTGAAGATACACAGAAGATTGAGGCACTGAGAATGGAAGTTGAGAACCTAAAGACTTCACTTGAGTCAGAGAAACAGAAAGCTGATGACTTTGAAAGAAAATATAATGAAGCTCAAATTTGTAGTGAAGAACGAGGTAAAAAATTAGAAGACACAGAAAAGAAGGTTCGTCAGCTTCAAGAATCATTGACCAGGCTAGAAGAGAAGATTACTAATGTGGAATCAGAGAACCAGGTTCTACGTCAACAAGCTGTGTCTATGGCACCTAATAAGTTCCTTTCAGGACGCTCCAGATCAATTGTCCAGAGAGGTGCTGAAAGTGGGCATCTGTCAGTGGAAACGAAGACACATTCGACTAATCAGGAACTGCATAGCCAATCAATGAACCAGAGGGAATCCTCTGAAGTGGAGGATAGACCACAAAAGTCACTAAATGAGAAACAACAGGAGAACCAAGAGTTACTCATTAGATGTATTGCACAACATCTAGGCTTTGCTGGGAACAGACCAATTGCTGCCTGTATCATATACAAATGCCTCTTGCATTGGAGATCATTTGAAGTTGAGCGTACTAGTGTTTTTGATCGTATCATTCAAACTATTGGCCATGCAATTGAGACCCAGGATAACAATGATATCTTGGCTTATTGGTTATCCAATGCCTCTACACTTCTCTTATTACTCCAGCGCACACTCAAAGCAAGTGGTGCTGCTGGGATGGCTCCGCAACGCCGTCGTTCTTCATCAGCAACCTTGTTTGGGAGGATGACTCAAAGTTTCCGTGGAGCTCCTGCTGGAGTCAATCTTTCTGTAATCAGTGGTAGCTCAAGCAGAGGAGTAGATACATTAAGACAAGTTGAAGCCAAGTACCCAGCTCTGCTTTTCAAACAGCAGCTTACAGCATATGTAGAAAAGATATATGGAATGATTCGTGATAGTTTGAAGAAAGAAATATCTCCCTTGCTTGGATTATGCATCCAGGCACCGAGAACATCCAGAGCTAGCTTGGTCAAGGGATCATCACGTTCTGTTGCAAATACTGAAGCACAACGTGCTTTGATTGCTCACTGGCAGGGGATAGTGAAGAGCCTAGGGAACTTTTTAAATACTTTGAAAGCAAATCATGTTCCCCCATTTTTGGTTCGTAAGGTGTTTACACAAATTTTTTCTTTCATTAATGTACAATTATTCAATAGTCTTCTTTTAAGACGGGAGTGCTGCTCATTTAGTAATGGAGAATATGTCAAAGCTGGTTTGGCTGAATTGGAGCATTGGTGTTATAAGGCAACAGATGAGTATGCAGGTTCAGCCTGGGATGAGCTCAAACATATTAGACAAGCTATTGGATTTCTGGTCATACACCAGAAACCAAAGAAAACACTGGATGAAATAAGCCATGACCTGTGCCCAGTCCTTAGTATACAGCAACTATATCGGATTAGCACCATGTACTGGGATGACAAATATGGAACTCATAGTGTGTCCCCTGATGTTATATCCAATATGAGAGTGTTGATGACTGAAGATTCAAATAATGCAGTTAGTAATTCTTTCCTGTTGGATGATGATTCAAGCATTCCGTTTTCTGTTGATGACATATCGAAGTCAATGGAACAGATAGATATCTCAGATATAGATCCCCCACCACTAATTCGTGAAAACTCTGGCTTTAGCTTTTTGTTACCGCGCCCAGATTGA 4647 0.4056 MSPMQWNYELSAQKETPVNIIVGSHVWIEDPEVCWIDGQVSKINGKDAEIETTNGKKVVAKLSKIYPKDMEAPPGGVDDMTKLSYLHEPGVLQNLKARYELNEIYTYTGNILIAINPFQRLPHIYGAHMMHQYKGAPFGELSPHVFAVADVAYRAMVNETKSNSILVSGESGAGKTETTKMLMQYLAFLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYLLCAAPQEEIEKYKLGNPRSFHYLNQSKCYELADISDAREYLATRRAMDIVGISQKDQEAIFRVVASILHLGNIDFTKGKEVDSSVPKDDKSKFHLKTTAELLMCDVDALEDALCKRVMITPEEVIKRSLDPQSAAVSRDGLAKTIYSRLFDWLVDTINNSIGQDPNSKSLIGVLDIYGFESFKSNSFEQFCINFTNEKLQQHFNQAKSQTEFFTSKYTKEQINWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKNHKRFIKPKLSRTDFTIAHYAGEVTYQSDQFLDKNKDYVVPEHQDLLGASKCSFVAGLFPPPPEETSKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAVFENVNIMQQLRCGGVLEAIRISCAGYPTRRPFFEFVNRFGLLAPEAMEANCDEKTACQKILENMGLKGYQIGKTKVFLRAGQMAELDARRAQVLSNAAKVIQGRIRTHQARKHYRALRKKTIYVQSRWRGRLACKIYENMRREAAAVKIQKNIRRYEARKAYKELHVSVITLQTALRAMAARKVFRFRKQTKASIIIQARWRCHKAALYYKRLKKGILVTQCRWRGRVARRELRKLKMAARETGALQEAKDKLEKRVEELTWRLQLEKGLRTNLEESKAQEIAKLQNSLQEMQSKVDEANALLIKERESAKKVIEEAPPVVKETQVIVEDTQKIEALRMEVENLKTSLESEKQKADDFERKYNEAQICSEERGKKLEDTEKKVRQLQESLTRLEEKITNVESENQVLRQQAVSMAPNKFLSGRSRSIVQRGAESGHLSVETKTHSTNQELHSQSMNQRESSEVEDRPQKSLNEKQQENQELLIRCIAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQDNNDILAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGAPAGVNLSVISGSSSRGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDSLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQRALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQIDISDIDPPPLIRENSGFSFLLPRPD 1548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi213g00094 1548 ProSiteProfiles IQ motif profile. 750 777 IPR000048 GO:0005515
Sebi213g00094 1548 ProSiteProfiles IQ motif profile. 821 850 IPR000048 GO:0005515
Sebi213g00094 1548 Pfam IQ calmodulin-binding motif 847 867 IPR000048 GO:0005515
Sebi213g00094 1548 Pfam IQ calmodulin-binding motif 752 771 IPR000048 GO:0005515
Sebi213g00094 1548 Pfam IQ calmodulin-binding motif 800 819 IPR000048 GO:0005515
Sebi213g00094 1548 Pfam IQ calmodulin-binding motif 871 890 IPR000048 GO:0005515
Sebi213g00094 1548 Gene3D - 800 846 - -
Sebi213g00094 1548 Gene3D - 847 897 - -
Sebi213g00094 1548 Gene3D - 749 799 - -
Sebi213g00094 1548 Gene3D - 265 323 - -
Sebi213g00094 1548 PANTHER MYOSIN 67 1479 - -
Sebi213g00094 1548 FunFam Myosin heavy chain 265 320 - -
Sebi213g00094 1548 FunFam unconventional myosin-Va 752 800 - -
Sebi213g00094 1548 Pfam Myosin head (motor domain) 77 735 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi213g00094 1548 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 800 IPR027417 -
Sebi213g00094 1548 Gene3D - 452 638 - -
Sebi213g00094 1548 PRINTS Myosin heavy chain signature 442 470 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi213g00094 1548 PRINTS Myosin heavy chain signature 162 187 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi213g00094 1548 PRINTS Myosin heavy chain signature 497 525 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi213g00094 1548 PRINTS Myosin heavy chain signature 209 236 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi213g00094 1548 PRINTS Myosin heavy chain signature 105 124 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi213g00094 1548 SMART DIL_2 1366 1473 IPR002710 -
Sebi213g00094 1548 Gene3D Kinesin motor domain 78 677 IPR036961 -
Sebi213g00094 1548 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 800 898 IPR027417 -
Sebi213g00094 1548 ProSiteProfiles IQ motif profile. 869 898 IPR000048 GO:0005515
Sebi213g00094 1548 Coils Coil 983 1066 - -
Sebi213g00094 1548 Pfam DIL domain 1367 1470 IPR002710 -
Sebi213g00094 1548 SMART iq_5 749 771 IPR000048 GO:0005515
Sebi213g00094 1548 SMART iq_5 797 819 IPR000048 GO:0005515
Sebi213g00094 1548 SMART iq_5 772 794 IPR000048 GO:0005515
Sebi213g00094 1548 SMART iq_5 845 867 IPR000048 GO:0005515
Sebi213g00094 1548 SMART iq_5 820 842 IPR000048 GO:0005515
Sebi213g00094 1548 SMART iq_5 868 890 IPR000048 GO:0005515
Sebi213g00094 1548 CDD MyosinXI_CBD 1129 1514 IPR037975 GO:0007015
Sebi213g00094 1548 CDD MYSc_Myo11 89 735 IPR036018 -
Sebi213g00094 1548 FunFam unconventional myosin-Va 849 896 - -
Sebi213g00094 1548 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 21 70 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sebi213g00094 1548 MobiDBLite consensus disorder prediction 1092 1113 - -
Sebi213g00094 1548 Gene3D Myosin VI head, motor domain, U50 subdomain 325 616 - -
Sebi213g00094 1548 ProSiteProfiles IQ motif profile. 773 802 IPR000048 GO:0005515
Sebi213g00094 1548 MobiDBLite consensus disorder prediction 1114 1129 - -
Sebi213g00094 1548 ProSiteProfiles IQ motif profile. 798 827 IPR000048 GO:0005515
Sebi213g00094 1548 FunFam unconventional myosin-Va 801 848 - -
Sebi213g00094 1548 MobiDBLite consensus disorder prediction 1086 1130 - -
Sebi213g00094 1548 ProSiteProfiles IQ motif profile. 846 873 IPR000048 GO:0005515
Sebi213g00094 1548 SMART MYSc_2a 70 748 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi213g00094 1548 Gene3D - 682 745 - -
Sebi213g00094 1548 ProSiteProfiles Dilute domain profile. 1178 1491 IPR002710 -
Sebi213g00094 1548 Coils Coil 931 965 - -
Sebi213g00094 1548 ProSiteProfiles Myosin motor domain profile. 75 747 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi213g00094 1548 Coils Coil 892 919 - -
Sebi213g00094 1548 Pfam Myosin N-terminal SH3-like domain 22 64 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sebi213g00094 1548 FunFam Myosin 2 325 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi213g00094 Sebi-Chr213 1339615 1353440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi213g00094 16 1548 Myosins gene family AT1G54560 84.083 0.0 2703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi213g00094 K10357 - gmx:100816792 2789.99