Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi213g00091 ATGCAAACTTACTTGCTGCTCTTCTATTGTTACATTGCCATCTCTCTTGTTTTTGCTGAGGGAGCTCAAGCTGCAGCAGATGATGAATTGTCAACTCTTCTCTCTATCAAATCCAGTATCAATGATCCAATGAATTATTTGAAGGATTGGAAACTACCAACCAATGTGACACAGAGAGGTTGGCTGCATTGTAACTGGACTGGAGTTGGTTGTAACTCTGAAGGCTTTGTAGAGAGTCTTCACCTCTACAACATGAACCTTAGTGGTCATGTTTCAGACCACATCCAATCCCTTTCAAGTCTTTCTTTTTTCAACATAAGCTGCAACAACTTTGCTTCAAAACTTCCCAAATCACTGTCCAACCTCACCTCTCTGAAGAGCTTTGATGTGAGCCAGAACTACTTCACTGGCAGCTTTCCAACTGGTCTCGGAGGAGCTGCAGGGTTGAGATCAATTAATGCATCAAGCAATGATTTCTCAGGTCTTCTTCCTGAGGATATTGGAAATGCAACATTGCTTGAGAGCCTTGATTTTCGAGGGAGCTACTTTGTAAGTTCAATCCCCAGGAGTTTTAAAAATTTGCAGAAGCTCAAGTTTTTAGGCCTTTCAGGCAATAACTTCACAGGGAGGATTCCAGGGTATCTTGGGGAACTCATTTCTCTGGAGACATTAATTCTAGGATACAATGAGTTTGAAGGTGAGATCCCTGCAGAGTTTGGCAACCTGACCAATCTTCAATACCTTGACTTGGCTGTAGGCAGTCTGAGTGGCCAGATTCCACCTGAGTTGGGTAAGCTGAAAAAACTCACTACAGTTTACTTATATCATAACAACTTCACAGGAAAAATTCCACCTCAACTTGGCAACATTATGTCACTAGAATTTCTGGACCTCTCTGACAATCAGATCTCAGGAGAGATTCCAGAAGAACTTGCTAAATTGGAAAACCTGCAGCTCTTGAATTTGATGACCAACAAACTAACTGGTCCTGTACCTGAGAAGCTTGGTGAATTGAAACATTTACAGGTGCTTGAGCTATGGAAAAATTCTTTAGAAGGTCCTTTGCCACTAAACCTTGGAAAAAATTCTCCTTTGCAGTGGTTGGATGTGTCCTCTAACTCATTGTCTGGTGAGATCCCTCCAGGTTTGTGTACTACAGGCAATCTAACTAAACTAATCCTCTTCAACAATTCCTTCTCTGGTTCCATTCCAAGTGGACTTTCAAACTGTTTATCACTGGTACGTGTAAGGATTCAGAACAATCTTATTTCTGGAACTATTCCAGTTGGCTTTGGGAACCTCCCAGGGCTTCAACGGCTGGAGTTGGCAAAGAACAACCTCACTGGGCAAATTCCAATAGATATTACCTCATCCACATCACTCTCTTTCATTGATGTATCTTGGAACCACCTTGAGTCATCTCTGCCTTCAGAAATTCTTTCCATTCCAACCCTTCAAACCTTCATTGCCTCTCACAACAACTTTGGAGGAACTGTCCCAGCTGAGTTCCAGGACTGTCCATCTCTCTCTGTGCTGGATCTTTCAAACACAAATATCTCTGGCACTATCCCAGAAAGCATTGCTTCTTGTCAAAAGTTAGTCAACCTTAACCTCAGAAACAACCACTTGACAGGTGGAATCCCCAAATCAATCACAAACATGCCCACCTTATCTGTTCTTGATTTGTCCAACAATTCATTGACTGGTAGGATACCTGAAAACTTTGGTAGTTCCCCAGCTCTGGAAATGCTGAACCTATCCTTTAACAAACTTGAGGGCCCAGTACCCTCCAATATGGTGACCATAAACCCTAATGATCTTATTGGCAATGCGGGTCTTTGCGGAGGCATTCTCCCTCCATGTTCTCAGAATTTGACTGTGACAAAACAGCGAAAGAGCTCACACGGTAGACACATCATTATTGGATTTGTAACTGGCATTTCAGTGATTTTATCTCTTGGTGCAGCATATTTTGGTGGTAGATGTGTATACAAGAGATGGTACTTGTATAACAATTTTGTCCATGATTGGTTCAGACAGAGCAATGAAGATTGGCCCTGGAGGTTAGTAGCATTCCAAAGGATCAGTTTCACTAGCAGTGAGATCCTAACTTGCATAAAGGAATCAAATGTCATAGGCATGGGTGGCACTGGTATTGTTTACAAAGCTGAAATCCATAGACCTCACGTTACCGTAGCAGTGAAGAAACTATGGAGGTCAAGAACAGACATAGAAAATGGGAATAATGATGTATTAAGAGAAGTGGAACTCCTAGGGAGACTTAGGCATAGAAATATTAATGAGACAGTTACAATGGTGGCTGGATCTTATGGATATATAGCACCAGAATATGGATACACTCTGAAGGTTGACGAGAAGATTGACATATATAGTTATGGAGTAGTACTTTTGGAGCTCCTAACTGGCAAAAAGCCTTTAGACCCAGCGTTTGAAGAATCTGTAGACATAGTCGAATGGATAAGGAAGAAGAGAAACAACAAAGCCTTGTTAGAAGTGCTAGATCCCACCATAGCTGGTCAGTGCAAGCATGTCCAAGAAGAGATGCTTCTTGTACTCCGGATTGCACTTCTATGTACTGCGAAGCTTCCCAAGGAAAGACCATCCATGAGAGACATCATCACAATGCTTGGAGAGGCAAAGCCCAGAAGGAAAAGCGTTTGCCAAAATGGGGGACAACAAAGTAGCATGGAAAAACCACCAACTATCTTTAACACCTCCCCAGTAGCAAGTCTTTTGTAA 2760 0.421 MQTYLLLFYCYIAISLVFAEGAQAAADDELSTLLSIKSSINDPMNYLKDWKLPTNVTQRGWLHCNWTGVGCNSEGFVESLHLYNMNLSGHVSDHIQSLSSLSFFNISCNNFASKLPKSLSNLTSLKSFDVSQNYFTGSFPTGLGGAAGLRSINASSNDFSGLLPEDIGNATLLESLDFRGSYFVSSIPRSFKNLQKLKFLGLSGNNFTGRIPGYLGELISLETLILGYNEFEGEIPAEFGNLTNLQYLDLAVGSLSGQIPPELGKLKKLTTVYLYHNNFTGKIPPQLGNIMSLEFLDLSDNQISGEIPEELAKLENLQLLNLMTNKLTGPVPEKLGELKHLQVLELWKNSLEGPLPLNLGKNSPLQWLDVSSNSLSGEIPPGLCTTGNLTKLILFNNSFSGSIPSGLSNCLSLVRVRIQNNLISGTIPVGFGNLPGLQRLELAKNNLTGQIPIDITSSTSLSFIDVSWNHLESSLPSEILSIPTLQTFIASHNNFGGTVPAEFQDCPSLSVLDLSNTNISGTIPESIASCQKLVNLNLRNNHLTGGIPKSITNMPTLSVLDLSNNSLTGRIPENFGSSPALEMLNLSFNKLEGPVPSNMVTINPNDLIGNAGLCGGILPPCSQNLTVTKQRKSSHGRHIIIGFVTGISVILSLGAAYFGGRCVYKRWYLYNNFVHDWFRQSNEDWPWRLVAFQRISFTSSEILTCIKESNVIGMGGTGIVYKAEIHRPHVTVAVKKLWRSRTDIENGNNDVLREVELLGRLRHRNINETVTMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGKKPLDPAFEESVDIVEWIRKKRNNKALLEVLDPTIAGQCKHVQEEMLLVLRIALLCTAKLPKERPSMRDIITMLGEAKPRRKSVCQNGGQQSSMEKPPTIFNTSPVASLL 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi213g00091 919 FunFam Leucine-rich repeat receptor protein kinase EMS1 283 366 - -
Sebi213g00091 919 SUPERFAMILY RNI-like 255 602 - -
Sebi213g00091 919 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 26 181 - -
Sebi213g00091 919 MobiDBLite consensus disorder prediction 890 919 - -
Sebi213g00091 919 SUPERFAMILY L domain-like 63 328 - -
Sebi213g00091 919 ProSitePatterns Protein kinases ATP-binding region signature. 712 736 IPR017441 GO:0005524
Sebi213g00091 919 PRINTS Leucine-rich repeat signature 293 306 - -
Sebi213g00091 919 PRINTS Leucine-rich repeat signature 554 567 - -
Sebi213g00091 919 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 182 282 - -
Sebi213g00091 919 Gene3D Phosphorylase Kinase; domain 1 691 771 - -
Sebi213g00091 919 Gene3D Ribonuclease Inhibitor 28 145 IPR032675 -
Sebi213g00091 919 Pfam Protein kinase domain 770 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi213g00091 919 ProSiteProfiles Leucine-rich repeat profile. 292 315 IPR001611 GO:0005515
Sebi213g00091 919 Gene3D Ribonuclease Inhibitor 333 629 IPR032675 -
Sebi213g00091 919 SUPERFAMILY Protein kinase-like (PK-like) 706 884 IPR011009 -
Sebi213g00091 919 MobiDBLite consensus disorder prediction 893 919 - -
Sebi213g00091 919 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 367 625 - -
Sebi213g00091 919 Pfam Leucine rich repeat 413 471 IPR001611 GO:0005515
Sebi213g00091 919 Pfam Leucine rich repeat 532 591 IPR001611 GO:0005515
Sebi213g00091 919 Pfam Leucine rich repeat N-terminal domain 26 72 IPR013210 -
Sebi213g00091 919 Gene3D Transferase(Phosphotransferase) domain 1 772 906 - -
Sebi213g00091 919 Gene3D Ribonuclease Inhibitor 146 234 IPR032675 -
Sebi213g00091 919 Gene3D Ribonuclease Inhibitor 235 332 IPR032675 -
Sebi213g00091 919 PANTHER UNNAMED PRODUCT 11 816 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi213g00091 Sebi-Chr213 1278687 1281866 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi213g00091 767 919 Receptor kinase-like Gene Family AT1G08590 70.779 8.18e-62 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sebi213g00091 Pkinase 6.4e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi213g00091 - - gmx:100793873 1299.65