Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi213g00084 ATGGCTTCTAACCCCAAAGTTAATAAGGCCTATGATGCTATGAGGGCCTTAGGAATTTCTGATGAAGAGGTGAAACCGGTGTTGAAAAAATTGTTAAAAGCATATGAAAATAATTGGGAACTTATTGAAGAAGACAATTATCGGACACTAGCAGATGCATACTTTGAGTCTATGGATGATAAGCAAGCAGAATGTAAGAGAAAAGCTCCAATCAGTTATCATGATGGAGAAAGACCAAAACAGAAACAACACTTGATAGATAGAGATGACCAGGTTTCATCAATCGACAACCCAAGACAAGTGTTGTATGTAAAAGACACTGAAATACCTCCAAAGACTTTTAAACAGGAAATCGTTAAACCATCTCAAACTTCTATGGGAGATATGAAGCCTTGTTCACAAACATTGCAGACGAGGTTGAGCGAGGTAGAACAGATCTCAAATTCACCTTGCATGGCTGCTAGAGATAGAAAATCGTATCCTGAGATAGCATCATCTACAAGTCATTGTCAAGATCCAATTGAGGAGCCTAGCTCTCCTCATATTCAGAGGAAAAATATGTCAAGAGATCATCAGAAGAAGAAGCTTGTGAAATTAAGAATTGAGAAACCTAAGTTTCATCTTGGACCTGGATCAACTAGTAATGGTGGCTCATCTGATGCATCAAATGGAAAACGCAAGAAAGAAGATACCCCACCATGCAATAATAACACTGGAACCAGTAAGGGTAATATTGATATTGCTTCTTCACCTTCAGGAGAAGTTAAAATTTCTTTAAACTGTGAAGCTGCCTTGGGACAACCGAACTTCCATATTCCTAATTTGGATGAAGTTATAAAGTCCATGGAGGAGAAATACAAGACTGTTGAGCCCCAGCTATCGATGGTTAAGTTATTAGATGAGTTATGTGGAAGTTTTTTGAAGATGGGCTTGAATTTAAATCGAAAGGGATCAAATGCCAAGTATACCAATTCGCGAAAGGGCAAGCTATTTGTTGGTGACATAGCAAAAGGAGACTGTCTTTCCTTATCATTTCCTTGTGCATGTTCTCAAGAAACTGGTGGAGAGTTTGCTTACACTCCACAAGGTTTGTTAAAAGAAGAATTTTTAACAGCTTGCATGTCTATGAAAATTGAACCTCAAGATCATCATTTTGTGTATTGTCTTGAATGCCCATTGGAGAGGCCTAGGGATGAGAGCAAGGCAGAACCATGCAAGGGGCATCTGGTTCGGAAGTTTATAAAGGAATGCTGGAGGAAATGTGGATGTGACATGCAGTGTGGAAATCGGGTAGTGCAAAGAGGTTTAAGTTGTAAATTGCAGGTGTTCTTGACTCGAGAAGGAAAGGGTTGGGGTGTTAGAACACTAGAAGATTTGCCCAAGGGATGCTTTGTATGTGAATATATTGGGGAAATATTAACTAATACAGAGTTATATGAAAGGACTGTCCATAATTGCGGCAATGACAGACATACATATCCTGTAACCCTTGATGCAGACTGGGGCTCAGAAGGGGTGTTAAAGGATGAGGAGGCACTATGCTTGGATGCTACATATAATGGGAATGTTGCAAGGTTTATCAATCATAGGTGCTTTGATGCAAATCTAATAGACATTCCTGTTGAAGTGGAGACACCTGATCGCCACTATTATCATCTTGCCCTCTTTACAAGCAGAAAGGTGAATGCATACGAGGAGTTGACATGGGATTATGGTATTGACTTTGATGATCTTGACCATCCTATTAAAGCATTTCAATGTCGTTGTGGAAGTGCCTTCTGCCGTAATAAGCAACAAAAAGGAACTACATCATTGAAGAATAAAAAAGTCAGGGATACAAATGCAAACAAATAG 1854 0.3927 MASNPKVNKAYDAMRALGISDEEVKPVLKKLLKAYENNWELIEEDNYRTLADAYFESMDDKQAECKRKAPISYHDGERPKQKQHLIDRDDQVSSIDNPRQVLYVKDTEIPPKTFKQEIVKPSQTSMGDMKPCSQTLQTRLSEVEQISNSPCMAARDRKSYPEIASSTSHCQDPIEEPSSPHIQRKNMSRDHQKKKLVKLRIEKPKFHLGPGSTSNGGSSDASNGKRKKEDTPPCNNNTGTSKGNIDIASSPSGEVKISLNCEAALGQPNFHIPNLDEVIKSMEEKYKTVEPQLSMVKLLDELCGSFLKMGLNLNRKGSNAKYTNSRKGKLFVGDIAKGDCLSLSFPCACSQETGGEFAYTPQGLLKEEFLTACMSMKIEPQDHHFVYCLECPLERPRDESKAEPCKGHLVRKFIKECWRKCGCDMQCGNRVVQRGLSCKLQVFLTREGKGWGVRTLEDLPKGCFVCEYIGEILTNTELYERTVHNCGNDRHTYPVTLDADWGSEGVLKDEEALCLDATYNGNVARFINHRCFDANLIDIPVEVETPDRHYYHLALFTSRKVNAYEELTWDYGIDFDDLDHPIKAFQCRCGSAFCRNKQQKGTTSLKNKKVRDTNANK 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi213g00084 617 CDD SET_SETDB-like 331 572 - -
Sebi213g00084 617 MobiDBLite consensus disorder prediction 70 92 - -
Sebi213g00084 617 Gene3D - 1 60 IPR043017 -
Sebi213g00084 617 SMART set_7 438 578 IPR001214 GO:0005515
Sebi213g00084 617 MobiDBLite consensus disorder prediction 233 249 - -
Sebi213g00084 617 MobiDBLite consensus disorder prediction 152 249 - -
Sebi213g00084 617 ProSiteProfiles SET domain profile. 438 572 IPR001214 GO:0005515
Sebi213g00084 617 Gene3D SET domain 313 597 IPR046341 -
Sebi213g00084 617 ProSiteProfiles Pre-SET domain profile. 336 435 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Sebi213g00084 617 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 337 603 - -
Sebi213g00084 617 Pfam SET domain 450 572 IPR001214 GO:0005515
Sebi213g00084 617 Pfam Pre-SET motif 337 430 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Sebi213g00084 617 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 610 IPR025776 -
Sebi213g00084 617 MobiDBLite consensus disorder prediction 187 201 - -
Sebi213g00084 617 Pfam Ubiquitin-binding WIYLD domain 6 59 IPR018848 -
Sebi213g00084 617 SUPERFAMILY SET domain 336 595 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi213g00084 Sebi-Chr213 1136846 1140671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi213g00084 414 595 C2H2 Transcription Factor Family AT2G23740 40.426 8.13e-31 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sebi213g00084 SET 8.8e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi213g00084 - - psat:127094085 686.026