Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi213g00083 ATGTCTTCATCTTTTCCTGTTCTTCCCTCTTCCTCTGTGCAGACTGCATCAATAAATTCTAACATCAGAAATGCTGGGCACATGTTTTCAACCCCTGCTGGATGCCCTGATGACATCCCTTTTTCCTCTGTTTCAGAAATACATTCAACAACATTCAGTTCTCACCCTCAAGGCAATGATGATATTTCCTGGGGACCAGATCTGTTTCAAGATATTCAGTTTCCTGATAATGTTTCCATCCAGAATGATCATGTGGACTACAATGCTTCTTACATATCTAGTGACAATGCCAAAACAAATGATTTTGGGGAGTGGGTTGACCAGTTATTGTCAGGTGATGATTCTCCTCACCCAAATTGGAGTCAATTTCTCAGTGATGATAATGTAGCTGAACCAAAATCCAAGGAAACCCAGGTTTCACAACAGCAGCATGTACCATCTAGAGAAGTTAGCGATCTTCCTAATTCAGTGCCAAGTACACAACAAACTAAACCTAGAATGCGTTGGACTCCAGAACTTCATGAGGCCTTTGTGGAGGCAGTCAATAAGCTTGGTGGTAGTGAGAAGGCTACTCCAAAGGGTGTCTTGAACCTGATGAGAGTTGAAGGCCTTACCATTTATCATGTGAAAAGCCACCTACAGAAGTATAGAACTGCCAGATACAAACCTGAATCATCAGAAGGAATTCCTGAGAAAACATTAACTTCAATAGAAGAAATGAAGACTCTAGACTTAAAAACGAGTAAAGGGATAACTGAAGCATTGCGGTTGCAGATGGAACTCCAGAAGCGGCTTCATGAACAACTTGAGATTCAAAGAAAGTTGCAGATTCAAATTGAAAACCAAGGGAAGCGTCTTCAGATGATGTTTGAGAAGCAGATAAAATCTGATGAGCCTTCTGCTTCACTTTCAAAACCTTCTCCAACTGACAATTTAGAAAGCTCAAATGAGGGTCATGAAAAAATTGAAATCAACAGTAGCACTCCAGAAAACATGCCTGAGGAAAGTTCACAGGATACAAACACAAAACAAAAGGGAAATGATGCTAAAGTTACTGATGAACATGAGCTGGGAGATGATGCTCCTCCACCCTCAAAACGGGTGAGGAGTTGA 1113 0.4097 MSSSFPVLPSSSVQTASINSNIRNAGHMFSTPAGCPDDIPFSSVSEIHSTTFSSHPQGNDDISWGPDLFQDIQFPDNVSIQNDHVDYNASYISSDNAKTNDFGEWVDQLLSGDDSPHPNWSQFLSDDNVAEPKSKETQVSQQQHVPSREVSDLPNSVPSTQQTKPRMRWTPELHEAFVEAVNKLGGSEKATPKGVLNLMRVEGLTIYHVKSHLQKYRTARYKPESSEGIPEKTLTSIEEMKTLDLKTSKGITEALRLQMELQKRLHEQLEIQRKLQIQIENQGKRLQMMFEKQIKSDEPSASLSKPSPTDNLESSNEGHEKIEINSSTPENMPEESSQDTNTKQKGNDAKVTDEHELGDDAPPPSKRVRS 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi213g00083 370 MobiDBLite consensus disorder prediction 325 345 - -
Sebi213g00083 370 Gene3D - 163 222 - -
Sebi213g00083 370 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 161 221 IPR017930 -
Sebi213g00083 370 FunFam Myb family transcription factor 163 221 - -
Sebi213g00083 370 SUPERFAMILY Homeodomain-like 161 218 IPR009057 -
Sebi213g00083 370 MobiDBLite consensus disorder prediction 294 370 - -
Sebi213g00083 370 Coils Coil 252 272 - -
Sebi213g00083 370 NCBIfam myb-like DNA-binding domain, SHAQKYF class 164 218 IPR006447 GO:0003677
Sebi213g00083 370 Pfam Myb-like DNA-binding domain 166 217 IPR001005 -
Sebi213g00083 370 Pfam MYB-CC type transfactor, LHEQLE motif 251 295 IPR025756 -
Sebi213g00083 370 MobiDBLite consensus disorder prediction 346 370 - -
Sebi213g00083 370 MobiDBLite consensus disorder prediction 297 313 - -
Sebi213g00083 370 MobiDBLite consensus disorder prediction 116 165 - -
Sebi213g00083 370 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 137 341 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi213g00083 Sebi-Chr213 1125342 1127778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi213g00083 46 308 G2-like Transcription Factor Family AT3G04450 49.829 9.52e-74 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi213g00083 Myb_DNA-binding 8.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi213g00083 - - psat:127093006 456.832