Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi213g00078 ATGGTGAGGACTCCTTGTTGTGAGAAGATGGGTTTGAAGAAGGGACCTTGGACACCAGAAGAAGATCAAATATTGATTTCTCATATTCAACAATATGGCCATGGAAACTGGCGCGCCCTTCCAAAACAAGCTGGTTTGTTAAGGTGTGGTAAGAGTTGTAGGCTTCGTTGGATCAATTACCTGAGGCCAGATATTAAACGAGGGAAATTCAGCAAGGAAGAAGTAGAGACCATCCTCAAACTGCATGAAGTTCTTGGAAATAGATGGTCTGCTATTGCTGCAAGATTACCAGGACGAACGGACAATGAAGTAAAGAATTTTTGGCATACTCATTTGAAGAGGCGTGAGAGAAGTCAAGTGCATAGTACTACCAATATCAATACCTCCTCTTATCCCTTGCAAGAGGCACAAGCAACTTCTATTACTTCAGGGGCTTCAATAAATATGTCACGAGTAGATGTGGATGCATCAGGTGCGCCTATAACTTCTAGTCTCACTGGGAAGGTTTTGGTTGCCAATGATCATAGTTTACCTTCAAGGGGAAATCCACCTATTGTAGATCTAGGATTTTATGGTGCAGTGTCTTCTTCTGATCATATTTCAGGAGAAACAATGAGCAGTGATGTTCACAATGAGATGGGTGAAGAAATGGAATTTTGGTATGATCTTTTCATTAGGGGTCATCACAGGGGCATGGAAGTATAA 705 0.417 MVRTPCCEKMGLKKGPWTPEEDQILISHIQQYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGKFSKEEVETILKLHEVLGNRWSAIAARLPGRTDNEVKNFWHTHLKRRERSQVHSTTNINTSSYPLQEAQATSITSGASINMSRVDVDASGAPITSSLTGKVLVANDHSLPSRGNPPIVDLGFYGAVSSSDHISGETMSSDVHNEMGEEMEFWYDLFIRGHHRGMEV 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi213g00078 234 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 139 - -
Sebi213g00078 234 CDD SANT 69 112 IPR001005 -
Sebi213g00078 234 CDD SANT 16 61 IPR001005 -
Sebi213g00078 234 SMART sant 66 114 IPR001005 -
Sebi213g00078 234 SMART sant 13 63 IPR001005 -
Sebi213g00078 234 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Sebi213g00078 234 Gene3D - 13 66 - -
Sebi213g00078 234 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Sebi213g00078 234 FunFam MYB-related transcription factor 13 66 - -
Sebi213g00078 234 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Sebi213g00078 234 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Sebi213g00078 234 Gene3D - 69 130 - -
Sebi213g00078 234 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Sebi213g00078 234 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Sebi213g00078 234 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi213g00078 Sebi-Chr213 1077878 1078920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi213g00078 1 224 MYB Transcription Factor Family AT2G31180 46.914 4.95e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi213g00078 Myb_DNA-binding 4.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi213g00078 K09422 - gmx:102663040 286.574